RNA–Protein interactions for RNA: ENST00000473843.1

MACF1-215, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 2

Gene MACF1, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-215ENST00000473843 CCNA1P78396 465 aa13.91□□□□□ -0.18
MACF1-215ENST00000473843 CCDC129Q6ZRS4 1044 aa13.91□□□□□ -0.18
MACF1-215ENST00000473843 SIPA1L1O43166 1804 aa13.91□□□□□ -0.18
MACF1-215ENST00000473843 CHD9Q3L8U1 2897 aa13.91□□□□□ -0.18
MACF1-215ENST00000473843 C19orf81C9J6K1 198 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 ALDH1L1O75891 902 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 IGHA2P01877 340 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 PTPREP23469 700 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 PBX2P40425 430 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 KCNQ1P51787 676 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 RABL6Q3YEC7 729 aaPredicted RBP13.9□□□□□ -0.18
MACF1-215ENST00000473843 SLF2Q8IX21 1173 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 LPIN2Q92539 896 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 FERMT2Q96AC1 680 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 C11orf16Q9NQ32 467 aa13.9□□□□□ -0.18
MACF1-215ENST00000473843 BTDP43251 543 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 TFF2Q03403 129 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 GRB14Q14449 540 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 RRP1BQ14684 758 aaKnown RBP13.89□□□□□ -0.19
MACF1-215ENST00000473843 LRRC41Q15345 812 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 WDR78Q5VTH9 848 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 ZGPATQ8N5A5 531 aaKnown RBP13.89□□□□□ -0.19
MACF1-215ENST00000473843 NPLOC4Q8TAT6 608 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 FAM163AQ96GL9 167 aaPredicted RBP13.89□□□□□ -0.19
MACF1-215ENST00000473843 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.89□□□□□ -0.19
MACF1-215ENST00000473843 BICC1Q9H694 974 aaKnown RBP13.89□□□□□ -0.19
MACF1-215ENST00000473843 GNL3LQ9NVN8 582 aaKnown RBP13.89□□□□□ -0.19
MACF1-215ENST00000473843 RABGAP1Q9Y3P9 1069 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 NDUFB9Q9Y6M9 179 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 IVNS1ABPQ9Y6Y0 642 aa13.89□□□□□ -0.19
MACF1-215ENST00000473843 SEMA3EO15041 775 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 SEPT4O43236 478 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 ASNSP08243 561 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 RAB30Q15771 203 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 ANO1Q5XXA6 986 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 CCDC174Q6PII3 467 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 DZIP1Q86YF9 867 aaKnown RBP13.88□□□□□ -0.19
MACF1-215ENST00000473843 TMEM39AQ9NV64 488 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 DENND2AQ9ULE3 1009 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 PHF24Q9UPV7 400 aa13.88□□□□□ -0.19
MACF1-215ENST00000473843 GRXCR1A8MXD5 290 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 USP17L10C9JJH3 530 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 ERC2O15083 957 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 CNMDO75829 334 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 OLFML2BQ68BL8 750 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 SRCIN1Q9C0H9 1055 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 HERC5Q9UII4 1024 aaKnown RBP13.87□□□□□ -0.19
MACF1-215ENST00000473843 MSRAQ9UJ68 235 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 MROH7-TTC4A0A0A0MT08 1334 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 CDK5RAP2Q96SN8 1893 aa13.87□□□□□ -0.19
MACF1-215ENST00000473843 ZNFX1Q9P2E3 1918 aaKnown RBP13.86□□□□□ -0.19
MACF1-215ENST00000473843 FAM86C2PA6NEL3 165 aa13.86□□□□□ -0.19
MACF1-215ENST00000473843 PQBP1O60828 265 aaKnown RBP13.86□□□□□ -0.19
MACF1-215ENST00000473843 NBPF7P0C2Y1 421 aaPredicted RBP13.86□□□□□ -0.19
MACF1-215ENST00000473843 RHBDL3P58872 404 aa13.86□□□□□ -0.19
MACF1-215ENST00000473843 ANKRD44Q8N8A2 993 aa13.86□□□□□ -0.19
MACF1-215ENST00000473843 KLHDC4Q8TBB5 520 aa13.86□□□□□ -0.19
MACF1-215ENST00000473843 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
MACF1-215ENST00000473843 ZNF318Q5VUA4 2279 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 GPR75-ASB3A0A0A6YYF3 556 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 PPIGQ13427 754 aaKnown RBP eCLIP13.85□□□□□ -0.19
MACF1-215ENST00000473843 FAM47AQ5JRC9 791 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 TMEM240Q5SV17 173 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 MICALL1Q8N3F8 863 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 HERVK_113Q902F9 699 aa13.85□□□□□ -0.19
MACF1-215ENST00000473843 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 MAP4K4O95819 1239 aaPredicted RBP13.84□□□□□ -0.19
MACF1-215ENST00000473843 TIMP1P01033 207 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 ANKRD33Q7Z3H0 272 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 TOX2Q96NM4 488 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 NKX2-4Q9H2Z4 354 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 SLC28A3Q9HAS3 691 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 GINM1Q9NU53 330 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 FOCADQ5VW36 1801 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 REV3LO60673 3130 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 XIRP2A4UGR9 3374 aa13.84□□□□□ -0.19
MACF1-215ENST00000473843 DCDC2CA8MYV0 355 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 EYA2O00167 538 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 VAMP4O75379 141 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 FAAP100Q0VG06 881 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 SKIV2LQ15477 1246 aaKnown RBP13.83□□□□□ -0.2
MACF1-215ENST00000473843 ATP2B3Q16720 1220 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 SPTY2D1Q68D10 685 aaPredicted RBP13.83□□□□□ -0.2
MACF1-215ENST00000473843 MFSD5Q6N075 450 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 PSRC1Q6PGN9 363 aaPredicted RBP13.83□□□□□ -0.2
MACF1-215ENST00000473843 USP17L2Q6R6M4 530 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 SLC4A10Q6U841 1118 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 C16orf59Q7L2K0 433 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 DPP9Q86TI2 863 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 KHSRPQ92945 711 aaKnown RBP eCLIP13.83□□□□□ -0.2
MACF1-215ENST00000473843 EMILIN3Q9NT22 766 aa13.83□□□□□ -0.2
MACF1-215ENST00000473843 PDS5AQ29RF7 1337 aaKnown RBP13.83□□□□□ -0.2
MACF1-215ENST00000473843 A0A1W2PQ45 241 aaPredicted RBP13.82□□□□□ -0.2
MACF1-215ENST00000473843 A0A1W2PQY0 241 aa13.82□□□□□ -0.2
MACF1-215ENST00000473843 PRR33A8MZF0 331 aa13.82□□□□□ -0.2
MACF1-215ENST00000473843 USP17L15C9J2P7 530 aa13.82□□□□□ -0.2
MACF1-215ENST00000473843 USP17L13C9JLJ4 530 aa13.82□□□□□ -0.2
MACF1-215ENST00000473843 USP17L11C9JVI0 530 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms