RNA–Protein interactions for RNA: ENST00000471880.5

SSR4-208, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 5

Gene SSR4, Length 785 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-208ENST00000471880 EVI5LQ96CN4 794 aa17.73■□□□□ 0.43
SSR4-208ENST00000471880 ASCC2Q9H1I8 757 aaPredicted RBP17.73■□□□□ 0.43
SSR4-208ENST00000471880 PTCH2Q9Y6C5 1203 aa17.73■□□□□ 0.43
SSR4-208ENST00000471880 GNAT2P19087 354 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 FCGRTP55899 365 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 GABPAQ06546 454 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 SLC9C1Q4G0N8 1177 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 SH3D19Q5HYK7 790 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 ACER1Q8TDN7 264 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 NACAP1Q9BZK3 213 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 STAP2Q9UGK3 403 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 TAOK2Q9UL54 1235 aa17.72■□□□□ 0.43
SSR4-208ENST00000471880 GSG1L2A8MUP6 293 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 RAD21O60216 631 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 BCRP11274 1271 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 AKR1B1P15121 316 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 HOXD10P28358 340 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 CDK8P49336 464 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 USP14P54578 494 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 NUCB1Q02818 461 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 CCDC129Q6ZRS4 1044 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 TMEM179Q6ZVK1 233 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 RAET1EQ8TD07 263 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 TRIM47Q96LD4 638 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 MKNK2Q9HBH9 465 aa17.71■□□□□ 0.43
SSR4-208ENST00000471880 BRCA2P51587 3418 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 PLXNB2O15031 1838 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 TNPO2O14787 897 aaKnown RBP17.7■□□□□ 0.42
SSR4-208ENST00000471880 ZMYM1Q5SVZ6 1142 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 CLEC10AQ8IUN9 316 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 PAGR1Q9BTK6 254 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 NAPBQ9H115 298 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 EMILIN3Q9NT22 766 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 MYPNQ86TC9 1320 aa17.7■□□□□ 0.42
SSR4-208ENST00000471880 GCLCP48506 637 aaPredicted RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 ICA1Q05084 483 aa17.69■□□□□ 0.42
SSR4-208ENST00000471880 SAMD1Q6SPF0 538 aaPredicted RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 C16orf86Q6ZW13 317 aa17.69■□□□□ 0.42
SSR4-208ENST00000471880 CCAR1Q8IX12 1150 aaKnown RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 ARHGEF10LQ9HCE6 1279 aa17.69■□□□□ 0.42
SSR4-208ENST00000471880 CWC22Q9HCG8 908 aaKnown RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 EPB41L4AQ9HCS5 686 aaPredicted RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 BIN2Q9UBW5 565 aaPredicted RBP17.69■□□□□ 0.42
SSR4-208ENST00000471880 PATL2C9JE40 543 aaKnown RBP17.68■□□□□ 0.42
SSR4-208ENST00000471880 GNRH1P01148 92 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 GUCY1A2P33402 732 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 GIMAP6Q6P9H5 292 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 NBPF11Q86T75 865 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 IFNL3Q8IZI9 196 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 SH3TC2Q8TF17 1288 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 CCDC17Q96LX7 622 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 P2RX7Q99572 595 aaKnown RBP17.68■□□□□ 0.42
SSR4-208ENST00000471880 SRRDQ9UH36 339 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 RLFQ13129 1914 aa17.68■□□□□ 0.42
SSR4-208ENST00000471880 HERVK_113P62684 666 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 FAM110CQ1W6H9 321 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 PLEKHM2Q8IWE5 1019 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 COA7Q96BR5 231 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 TANGO6Q9C0B7 1094 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 KIAA1683Q9H0B3 1180 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 RPAP3Q9H6T3 665 aaPredicted RBP17.67■□□□□ 0.42
SSR4-208ENST00000471880 PARP14Q460N5 1801 aa17.67■□□□□ 0.42
SSR4-208ENST00000471880 GREB1LQ9C091 1923 aaPredicted RBP17.66■□□□□ 0.42
SSR4-208ENST00000471880 POTEFA5A3E0 1075 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L15C9J2P7 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L13C9JLJ4 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L11C9JVI0 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L18D6R9N7 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L22D6RA61 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L17D6RBQ6 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L19D6RCP7 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L20D6RJB6 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 PEX10O60683 326 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 PRDM1O75626 825 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 SLC3A2P08195 630 aaKnown RBP17.66■□□□□ 0.42
SSR4-208ENST00000471880 VCAM1P19320 739 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 HOXA7P31268 230 aaPredicted RBP17.66■□□□□ 0.42
SSR4-208ENST00000471880 PRMT2P55345 433 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 PRKCZQ05513 592 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 USP17L24Q0WX57 530 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 SBK1Q52WX2 424 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 ZNF444Q8N0Y2 327 aaPredicted RBP17.66■□□□□ 0.42
SSR4-208ENST00000471880 SPICE1Q8N0Z3 855 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 SH2D4AQ9H788 454 aa17.66■□□□□ 0.42
SSR4-208ENST00000471880 MLLT1Q03111 559 aaPredicted RBP17.65■□□□□ 0.42
SSR4-208ENST00000471880 NMIQ13287 307 aaPredicted RBP17.65■□□□□ 0.42
SSR4-208ENST00000471880 WDR78Q5VTH9 848 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 POTEEQ6S8J3 1075 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 ARMC5Q96C12 935 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 TMEM106CQ9BVX2 250 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 ZNF287Q9HBT7 754 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 GABRQQ9UN88 632 aa17.65■□□□□ 0.42
SSR4-208ENST00000471880 MKI67P46013 3256 aaKnown RBP17.64■□□□□ 0.42
SSR4-208ENST00000471880 A0A0D9SFI3 127 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 A0A1W2PRG0 241 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 EEF2P13639 858 aaKnown RBP17.64■□□□□ 0.41
SSR4-208ENST00000471880 PDE4BQ07343 736 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 GPRC5AQ8NFJ5 357 aa17.64■□□□□ 0.41
SSR4-208ENST00000471880 C12orf42Q96LP6 360 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms