RNA–Protein interactions for RNA: ENST00000471660.5

CHMP2B-203, Transcript of charged multivesicular body protein 2B, humanhuman

TSL 2 BASIC

Gene CHMP2B, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-203ENST00000471660 DCAF5Q96JK2 942 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 JAKMIP1Q96N16 626 aaKnown RBP12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 CTAGE15A4D2H0 777 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 CTAGE8P0CG41 777 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 CPA1P15085 419 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 ATP2B2Q01814 1243 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 DPCR1Q3MIW9 517 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 G2E3Q7L622 706 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 CTAGE6Q86UF2 777 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 TRIM74Q86UV6 250 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 TRIM73Q86UV7 250 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 CTAGE4Q8IX94 777 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 LMBR1Q8WVP7 490 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 SPDL1Q96EA4 605 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 ACTR5Q9H9F9 607 aaPredicted RBP12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 KIAA1468Q9P260 1216 aa12.14□□□□□ -0.47
CHMP2B-203ENST00000471660 AHCYL1O43865 530 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 FESP07332 822 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 TOP1P11387 765 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 ADD1P35611 737 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 NLRP12P59046 1061 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 GNGT1P63211 74 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 MSL1Q68DK7 614 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 FAM228AQ86W67 206 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 CCDC13Q8IYE1 715 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 ZSWIM4Q9H7M6 989 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 DDX21Q9NR30 783 aaKnown RBP eCLIP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 DOT1LQ8TEK3 1739 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 USP42Q9H9J4 1324 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 TARSL2A2RTX5 802 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 AGPSO00116 658 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 RTN3O95197 1032 aaPredicted RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 NBPF7P0C2Y1 421 aaPredicted RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 RHOXF2BP0C7M4 288 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 PSMD2Q13200 908 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 SLMAPQ14BN4 828 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 TOGARAM2Q6ZUX3 1019 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 TAX1BP1Q86VP1 789 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 FMR1NBQ8N0W7 255 aaPredicted RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 RHOXF2Q9BQY4 288 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 CHCHD3Q9NX63 227 aaKnown RBP12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 TAF1LQ8IZX4 1826 aa12.13□□□□□ -0.47
CHMP2B-203ENST00000471660 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 MAFGO15525 162 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 ZNF202O95125 648 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 SETSIPP0DME0 302 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 GGCXP38435 758 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 UBASH3AP57075 661 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 CCT2P78371 535 aaKnown RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 CRACR2AQ9BSW2 395 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 USP44Q9H0E7 712 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 SLC52A2Q9HAB3 445 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 MIS18AQ9NYP9 233 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 UTRNP46939 3433 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 KDM6AO15550 1401 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 GOLGA6L7A0A1B0GV03 622 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 NDUFAB1O14561 156 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 LIN7AO14910 233 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 ATP5JP18859 108 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 GBP2P32456 591 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 ADCK5Q3MIX3 580 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 BEND3Q5T5X7 828 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 SLC4A10Q6U841 1118 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 CEP57Q86XR8 500 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 ZBTB10Q96DT7 871 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 SUDS3Q9H7L9 328 aaPredicted RBP12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
CHMP2B-203ENST00000471660 A0A087WWV3 80 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 KIF5CO60282 957 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 CCDC175P0C221 793 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 FAM163BP0C2L3 166 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 EPB41P11171 864 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 IMPDH2P12268 514 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 NAP1L1P55209 391 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 CYB5D1Q6P9G0 228 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 MFN1Q8IWA4 741 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 C3orf20Q8ND61 904 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 SPDYE1Q8NFV5 336 aaPredicted RBP12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 MKL1Q969V6 931 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 NEDD4P46934 1319 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 TOGARAM1Q9Y4F4 1720 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 CTAGE9A4FU28 777 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 PHKG2P15735 406 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 KCNB1Q14721 858 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 PRPF40BQ6NWY9 871 aaKnown RBP12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 FUKQ8N0W3 1084 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 LINS1Q8NG48 757 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 LGR6Q9HBX8 967 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 SAMM50Q9Y512 469 aa12.11□□□□□ -0.47
CHMP2B-203ENST00000471660 A0A1W2PQ27 194 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 A0A1W2PQ64 194 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 A0A1W2PQD8 194 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 ERICH2A1L162 156 aa12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 SKAP2O75563 359 aaPredicted RBP12.1□□□□□ -0.47
CHMP2B-203ENST00000471660 USP14P54578 494 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms