RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 RGS16O15492 202 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PARP1P09874 1014 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 KCNA4P22459 653 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 ASPHQ12797 758 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 TBC1D9Q6ZT07 1266 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 RAB44Q7Z6P3 723 aaPredicted RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 IGSF22Q8N9C0 903 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 MIGA1Q8NAN2 632 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PICK1Q9NRD5 415 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 E9PMD0 336 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 CAPN9O14815 690 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 CCNT1O60563 726 aaKnown RBP7.6□□□□□ -1.19
BRCA1-210ENST00000471181 STAM2O75886 525 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 NUCB1Q02818 461 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 TBC1D8BQ0IIM8 1120 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 KRT71Q3SY84 523 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 TMEM259Q4ZIN3 620 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 RAPH1Q70E73 1250 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 CROCCP2Q86T23 111 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 PIP4K2CQ8TBX8 421 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 RAB20Q9NX57 234 aa7.6□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGEF35A5YM69 484 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 GPC4O75487 556 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 TRAPPC10P48553 1259 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ZYXQ15942 572 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 KRT80Q6KB66 452 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 RPGRIP1Q96KN7 1286 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 DRC3Q9H069 523 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 MAPK8IP1Q9UQF2 711 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 CFAP43Q8NDM7 1665 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ELP1O95163 1332 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 H0YC42 278 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 GNA11P29992 359 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 GARSP41250 739 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 STX1BP61266 288 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SKOR1P84550 965 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 PAK2Q13177 524 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 HSP90AA5PQ58FG0 334 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ANGPTL8Q6UXH0 198 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 THEMISQ8N1K5 641 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 KCNH5Q8NCM2 988 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 PAWRQ96IZ0 340 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 TMX3Q96JJ7 454 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ZFYVE19Q96K21 471 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SYTL2Q9HCH5 934 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 MAGED2Q9UNF1 606 aaPredicted RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 LRRD1A4D1F6 860 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 TMPOP42166 694 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 DAB2P98082 770 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 NONOQ15233 471 aaKnown RBP eCLIP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SESTD1Q86VW0 696 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 TTC30AQ86WT1 665 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 JDP2Q8WYK2 163 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ALKBH8Q96BT7 664 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 AZI2Q9H6S1 392 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 IPO11Q9UI26 975 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 DAAM1Q9Y4D1 1078 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SCINQ9Y6U3 715 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 IVNS1ABPQ9Y6Y0 642 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGEF9O43307 516 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SORBS3O60504 671 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SNX1Q13596 522 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 PRKG1Q13976 671 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 PUM3Q15397 648 aaKnown RBP7.59□□□□□ -1.19
BRCA1-210ENST00000471181 ARHGAP44Q17R89 818 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 FBXL13Q8NEE6 735 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 MRFAP1L1Q96HT8 127 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 SETDB2Q96T68 719 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 UGGT2Q9NYU1 1516 aa7.59□□□□□ -1.19
BRCA1-210ENST00000471181 H3BRJ5 948 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 IFNB1P01574 187 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 TUBBP07437 444 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 ADCY8P40145 1251 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 KLHL40Q2TBA0 621 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 TRIM59Q8IWR1 403 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 GDAP1L1Q96MZ0 367 aa7.59□□□□□ -1.2
BRCA1-210ENST00000471181 NAIPQ13075 1403 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 EVI5O60447 810 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 OAS2P29728 719 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 EIF6P56537 245 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ESRRGP62508 458 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 CCDC85BQ15834 202 aaPredicted RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 SLC9C1Q4G0N8 1177 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 FAM47CQ5HY64 1035 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ZRANB1Q9UGI0 708 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 SCOCQ9UIL1 159 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 CAPN11Q9UMQ6 739 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 MAN1A2O60476 641 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 LUC7L3O95232 432 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 F13A1P00488 732 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 DNM2P50570 870 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 KRT33BQ14525 404 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 TTC22Q5TAA0 569 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 SZRD1Q7Z422 152 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 ZFYVE1Q9HBF4 777 aa7.58□□□□□ -1.2
BRCA1-210ENST00000471181 LARSQ9P2J5 1176 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 RPSAP08865 295 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 CTNNA1P35221 906 aaKnown RBP7.58□□□□□ -1.2
BRCA1-210ENST00000471181 GNGT1P63211 74 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms