RNA–Protein interactions for RNA: ENST00000468358.5

CLDN11-202, Transcript of claudin 11, humanhuman

TSL 3

Gene CLDN11, Length 593 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-202ENST00000468358 USP17L2Q6R6M4 530 aa20.7■□□□□ 0.9
CLDN11-202ENST00000468358 TMEM179Q6ZVK1 233 aa20.7■□□□□ 0.9
CLDN11-202ENST00000468358 FAM227BQ96M60 508 aa20.7■□□□□ 0.9
CLDN11-202ENST00000468358 MKNK2Q9HBH9 465 aa20.7■□□□□ 0.9
CLDN11-202ENST00000468358 ZSWIM8A7E2V4 1837 aa20.69■□□□□ 0.9
CLDN11-202ENST00000468358 A0A0D9SFI3 127 aa20.69■□□□□ 0.9
CLDN11-202ENST00000468358 LACTBP83111 547 aaPredicted RBP20.69■□□□□ 0.9
CLDN11-202ENST00000468358 FBXO46Q6PJ61 603 aaPredicted RBP20.69■□□□□ 0.9
CLDN11-202ENST00000468358 ACER1Q8TDN7 264 aa20.69■□□□□ 0.9
CLDN11-202ENST00000468358 CCDC17Q96LX7 622 aa20.69■□□□□ 0.9
CLDN11-202ENST00000468358 ADGRA2Q96PE1 1338 aa20.69■□□□□ 0.9
CLDN11-202ENST00000468358 GUCY1A2P33402 732 aa20.68■□□□□ 0.9
CLDN11-202ENST00000468358 USP14P54578 494 aa20.68■□□□□ 0.9
CLDN11-202ENST00000468358 MCMDC2Q4G0Z9 681 aa20.68■□□□□ 0.9
CLDN11-202ENST00000468358 ASCC2Q9H1I8 757 aaPredicted RBP20.68■□□□□ 0.9
CLDN11-202ENST00000468358 DIAPH3Q9NSV4 1193 aa20.68■□□□□ 0.9
CLDN11-202ENST00000468358 SDSP20132 328 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ATP2B2Q01814 1243 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ICA1Q05084 483 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 CLEC10AQ8IUN9 316 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ARHGAP39Q9C0H5 1083 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ZNF287Q9HBT7 754 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ARHGEF10LQ9HCE6 1279 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 EMILIN3Q9NT22 766 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 ROBO3Q96MS0 1386 aa20.67■□□□□ 0.9
CLDN11-202ENST00000468358 FMNL1O95466 1100 aaPredicted RBP20.66■□□□□ 0.9
CLDN11-202ENST00000468358 NEFLP07196 543 aa20.66■□□□□ 0.9
CLDN11-202ENST00000468358 SLC3A2P08195 630 aaKnown RBP20.66■□□□□ 0.9
CLDN11-202ENST00000468358 BCRP11274 1271 aa20.66■□□□□ 0.9
CLDN11-202ENST00000468358 ANKRD13CQ8N6S4 541 aa20.66■□□□□ 0.9
CLDN11-202ENST00000468358 KIAA1683Q9H0B3 1180 aa20.66■□□□□ 0.9
CLDN11-202ENST00000468358 HPS5Q9UPZ3 1129 aa20.66■□□□□ 0.9
CLDN11-202ENST00000468358 HIP1O00291 1037 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 PRDM1O75626 825 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 PSMC4P43686 418 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 CAP1Q01518 475 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 PPARAQ07869 468 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 VPS53Q5VIR6 699 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 SH2D4AQ9H788 454 aa20.65■□□□□ 0.9
CLDN11-202ENST00000468358 CCDC171Q6TFL3 1326 aa20.64■□□□□ 0.89
CLDN11-202ENST00000468358 GCLCP48506 637 aaPredicted RBP20.64■□□□□ 0.89
CLDN11-202ENST00000468358 MFAP1P55081 439 aaKnown RBP20.64■□□□□ 0.89
CLDN11-202ENST00000468358 PDE4BQ07343 736 aa20.64■□□□□ 0.89
CLDN11-202ENST00000468358 TTC22Q5TAA0 569 aa20.64■□□□□ 0.89
CLDN11-202ENST00000468358 CWC27Q6UX04 472 aaKnown RBP20.64■□□□□ 0.89
CLDN11-202ENST00000468358 ZNF444Q8N0Y2 327 aaPredicted RBP20.64■□□□□ 0.89
CLDN11-202ENST00000468358 C12orf42Q96LP6 360 aa20.64■□□□□ 0.89
CLDN11-202ENST00000468358 PTPN22Q9Y2R2 807 aa20.64■□□□□ 0.89
CLDN11-202ENST00000468358 MGAMO43451 1857 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 A0A1W2PRG0 241 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 RAD21O60216 631 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 VCAM1P19320 739 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 RASA1P20936 1047 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 HOXA7P31268 230 aaPredicted RBP20.63■□□□□ 0.89
CLDN11-202ENST00000468358 FCGRTP55899 365 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 ZNF589Q86UQ0 364 aaPredicted RBP20.63■□□□□ 0.89
CLDN11-202ENST00000468358 P2RX7Q99572 595 aaKnown RBP20.63■□□□□ 0.89
CLDN11-202ENST00000468358 KANSL2Q9H9L4 492 aa20.63■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L15C9J2P7 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L13C9JLJ4 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L11C9JVI0 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L18D6R9N7 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L22D6RA61 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L17D6RBQ6 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L19D6RCP7 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L20D6RJB6 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 HERVK_113P62684 666 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 USP17L24Q0WX57 530 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 FAM110CQ1W6H9 321 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 CENPQQ7L2Z9 268 aaPredicted RBP20.62■□□□□ 0.89
CLDN11-202ENST00000468358 TRIM47Q96LD4 638 aa20.62■□□□□ 0.89
CLDN11-202ENST00000468358 FOXP2O15409 715 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 GNRH1P01148 92 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 EEF2P13639 858 aaKnown RBP20.61■□□□□ 0.89
CLDN11-202ENST00000468358 GSPT1P15170 499 aaKnown RBP20.61■□□□□ 0.89
CLDN11-202ENST00000468358 HOXD10P28358 340 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 CTDSPL2Q05D32 466 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 PAGR1Q9BTK6 254 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 TANGO6Q9C0B7 1094 aa20.61■□□□□ 0.89
CLDN11-202ENST00000468358 RPAP3Q9H6T3 665 aaPredicted RBP20.61■□□□□ 0.89
CLDN11-202ENST00000468358 TNPO2O14787 897 aaKnown RBP20.6■□□□□ 0.89
CLDN11-202ENST00000468358 TSPY3P0CV98 308 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 TSPY8P0CW00 308 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 HSPD1P10809 573 aaKnown RBP20.6■□□□□ 0.89
CLDN11-202ENST00000468358 CTGFP29279 349 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 SPICE1Q8N0Z3 855 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 TOMM22Q9NS69 142 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 TMX2Q9Y320 296 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 PTCH2Q9Y6C5 1203 aa20.6■□□□□ 0.89
CLDN11-202ENST00000468358 MYPNQ86TC9 1320 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 GREB1LQ9C091 1923 aaPredicted RBP20.59■□□□□ 0.89
CLDN11-202ENST00000468358 FGAP02671 866 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 CENPBP07199 599 aaPredicted RBP20.59■□□□□ 0.89
CLDN11-202ENST00000468358 ALX1Q15699 326 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 CATSPERGQ6ZRH7 1159 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 CCDC136Q96JN2 1154 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 VCPKMTQ9H867 229 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 SRRDQ9UH36 339 aa20.59■□□□□ 0.89
CLDN11-202ENST00000468358 PRMT2P55345 433 aa20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms