RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 OPTNQ96CV9 577 aa20.13■□□□□ 0.81
VARS2-204ENST00000467717 JAKMIP1Q96N16 626 aaKnown RBP20.13■□□□□ 0.81
VARS2-204ENST00000467717 AS3MTQ9HBK9 375 aa20.13■□□□□ 0.81
VARS2-204ENST00000467717 RASSF10A6NK89 507 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 MCM5P33992 734 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 RBM25P49756 843 aaKnown RBP20.12■□□□□ 0.81
VARS2-204ENST00000467717 PPIL2Q13356 520 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 CYB5R4Q7L1T6 521 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 CCDC84Q86UT8 332 aaPredicted RBP20.12■□□□□ 0.81
VARS2-204ENST00000467717 ZNF280CQ8ND82 737 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 CNKSR2Q8WXI2 1034 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 CCDC102AQ96A19 550 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 IL17RAQ96F46 866 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 OTUD5Q96G74 571 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 CEP95Q96GE4 821 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 WDR18Q9BV38 432 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 IL17RBQ9NRM6 502 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 MTMR4Q9NYA4 1195 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 LAMB1P07942 1786 aa20.12■□□□□ 0.81
VARS2-204ENST00000467717 NMT2O60551 498 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 DEFB115Q30KQ5 88 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 DHX32Q7L7V1 743 aaKnown RBP20.11■□□□□ 0.81
VARS2-204ENST00000467717 RASAL3Q86YV0 1011 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 WNK4Q96J92 1243 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 ZSCAN10Q96SZ4 725 aaPredicted RBP20.11■□□□□ 0.81
VARS2-204ENST00000467717 UBAC1Q9BSL1 405 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 TM6SF1Q9BZW5 370 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 PCDH10Q9P2E7 1040 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 AFG3L2Q9Y4W6 797 aa20.11■□□□□ 0.81
VARS2-204ENST00000467717 IRF6O14896 467 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 TTLL1O95922 423 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 ZBTB48P10074 688 aaPredicted RBP20.1■□□□□ 0.81
VARS2-204ENST00000467717 NOVP48745 357 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 SPP2Q13103 211 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 SART3Q15020 963 aaKnown RBP20.1■□□□□ 0.81
VARS2-204ENST00000467717 SPRYD7Q5W111 196 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 BLOC1S2Q6QNY1 142 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 PAXIP1Q6ZW49 1069 aaPredicted RBP20.1■□□□□ 0.81
VARS2-204ENST00000467717 CLEC10AQ8IUN9 316 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 SIAH1Q8IUQ4 282 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 TTC14Q96N46 770 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 ZKSCAN3Q9BRR0 538 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 MTA3Q9BTC8 594 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 ARHGEF10LQ9HCE6 1279 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 NYAP2Q9P242 653 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 STX8Q9UNK0 236 aa20.1■□□□□ 0.81
VARS2-204ENST00000467717 TRPM7Q96QT4 1865 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 LAMA4Q16363 1823 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 ERICH2A1L162 156 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 CXCL11O14625 94 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 PRC1O43663 620 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 SLC10A3P09131 477 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 EEF2P13639 858 aaKnown RBP20.09■□□□□ 0.81
VARS2-204ENST00000467717 CASTP20810 708 aaKnown RBP20.09■□□□□ 0.81
VARS2-204ENST00000467717 ANTXR2P58335 489 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 ATP2B2Q01814 1243 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 COL9A3Q14050 684 aaPredicted RBP20.09■□□□□ 0.81
VARS2-204ENST00000467717 CHST3Q7LGC8 479 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 DGKHQ86XP1 1220 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 ACER1Q8TDN7 264 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 MKL1Q969V6 931 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 TBC1D32Q96NH3 1257 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 SH2D4AQ9H788 454 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 ZSWIM6Q9HCJ5 1215 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 KCNH4Q9UQ05 1017 aa20.09■□□□□ 0.81
VARS2-204ENST00000467717 TNKSO95271 1327 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 WDR19Q8NEZ3 1342 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 TRIM75PA6NK02 468 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 USP17L10C9JJH3 530 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 IFIT3O14879 490 aaKnown RBP20.08■□□□□ 0.81
VARS2-204ENST00000467717 GJA5P36382 358 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 CTCFP49711 727 aaPredicted RBP20.08■□□□□ 0.81
VARS2-204ENST00000467717 BACE1P56817 501 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 EXOSC10Q01780 885 aaKnown RBP20.08■□□□□ 0.81
VARS2-204ENST00000467717 ANKS1AQ92625 1134 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 TMEM87BQ96K49 555 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 FEZ1Q99689 392 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 CLIP2Q9UDT6 1046 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 SYNPO2Q9UMS6 1093 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 TMX2Q9Y320 296 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 CYP46A1Q9Y6A2 500 aa20.08■□□□□ 0.81
VARS2-204ENST00000467717 A0A1W2PRG0 241 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 FAM155AB1AL88 458 aaPredicted RBP20.07■□□□□ 0.8
VARS2-204ENST00000467717 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 ECE1P42892 770 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 SNAPC2Q13487 334 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 CYP4F22Q6NT55 531 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 RUFY3Q7L099 469 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 ENAHQ8N8S7 591 aaPredicted RBP20.07■□□□□ 0.8
VARS2-204ENST00000467717 KIAA1683Q9H0B3 1180 aa20.07■□□□□ 0.8
VARS2-204ENST00000467717 C19orf81C9J6K1 198 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 TOP1P11387 765 aaKnown RBP20.06■□□□□ 0.8
VARS2-204ENST00000467717 USP14P54578 494 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 MKRN3Q13064 507 aaKnown RBP20.06■□□□□ 0.8
VARS2-204ENST00000467717 MTMR2Q13614 643 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 TMEM67Q5HYA8 995 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 IFIT1BQ5T764 474 aaKnown RBP20.06■□□□□ 0.8
VARS2-204ENST00000467717 RCSD1Q6JBY9 416 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 IGDCC4Q8TDY8 1250 aa20.06■□□□□ 0.8
VARS2-204ENST00000467717 CAPNS2Q96L46 248 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 108.6 ms