RNA–Protein interactions for RNA: ENST00000466205.5

CD40-204, Transcript of CD40 molecule, humanhuman

TSL 1 (best)

Gene CD40, Length 822 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-204ENST00000466205 PSMC4P43686 418 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 IRX3P78415 501 aaPredicted RBP12.19□□□□□ -0.46
CD40-204ENST00000466205 ATP2B2Q01814 1243 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 C16orf86Q6ZW13 317 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 IFNL3Q8IZI9 196 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 ASCC2Q9H1I8 757 aaPredicted RBP12.19□□□□□ -0.46
CD40-204ENST00000466205 PNMA3Q9UL41 463 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 PTCH2Q9Y6C5 1203 aa12.19□□□□□ -0.46
CD40-204ENST00000466205 A0A0D9SFI3 127 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 A0A1W2PRG0 241 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 C19orf81C9J6K1 198 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 RAD21O60216 631 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 PRDM1O75626 825 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 BCRP11274 1271 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 GNAT2P19087 354 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 NMIQ13287 307 aaPredicted RBP12.18□□□□□ -0.46
CD40-204ENST00000466205 VPS53Q5VIR6 699 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 USP17L2Q6R6M4 530 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 TRIM47Q96LD4 638 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 NAPBQ9H115 298 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 GINM1Q9NU53 330 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 SLC45A1Q9Y2W3 748 aa12.18□□□□□ -0.46
CD40-204ENST00000466205 ICA1Q05084 483 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 PABPC4Q13310 644 aaKnown RBP eCLIP12.17□□□□□ -0.46
CD40-204ENST00000466205 SAMD1Q6SPF0 538 aaPredicted RBP12.17□□□□□ -0.46
CD40-204ENST00000466205 TMEM179Q6ZVK1 233 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 SH3TC2Q8TF17 1288 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 P2RX7Q99572 595 aaKnown RBP12.17□□□□□ -0.46
CD40-204ENST00000466205 PAGR1Q9BTK6 254 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 MKNK2Q9HBH9 465 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 TAOK2Q9UL54 1235 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 MYH8P13535 1937 aa12.17□□□□□ -0.46
CD40-204ENST00000466205 MYPNQ86TC9 1320 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 VCAM1P19320 739 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 SDSP20132 328 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 KCNA4P22459 653 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 FCGRTP55899 365 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 PRKCZQ05513 592 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 ARHGEF6Q15052 776 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 SBK1Q52WX2 424 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 KIAA1755Q5JYT7 1200 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 ZNF589Q86UQ0 364 aaPredicted RBP12.16□□□□□ -0.46
CD40-204ENST00000466205 SPICE1Q8N0Z3 855 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 NACAP1Q9BZK3 213 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 RPAP3Q9H6T3 665 aaPredicted RBP12.16□□□□□ -0.46
CD40-204ENST00000466205 INCENPQ9NQS7 918 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 GABRQQ9UN88 632 aa12.16□□□□□ -0.46
CD40-204ENST00000466205 TNPO2O14787 897 aaKnown RBP12.15□□□□□ -0.46
CD40-204ENST00000466205 FOXP2O15409 715 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 EEF2P13639 858 aaKnown RBP12.15□□□□□ -0.46
CD40-204ENST00000466205 RASA1P20936 1047 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 USP14P54578 494 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 HERVK_113P62684 666 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 CTDSPL2Q05D32 466 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 PPARAQ07869 468 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 MCMDC2Q4G0Z9 681 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 FAM47AQ5JRC9 791 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 GIMAP6Q6P9H5 292 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 CWC27Q6UX04 472 aaKnown RBP12.15□□□□□ -0.46
CD40-204ENST00000466205 SKAP1Q86WV1 359 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 SIAH1Q8IUQ4 282 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 KIAA1683Q9H0B3 1180 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 OSBPL3Q9H4L5 887 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 ARHGEF10LQ9HCE6 1279 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 TXNRD2Q9NNW7 524 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 HELLSQ9NRZ9 838 aa12.15□□□□□ -0.46
CD40-204ENST00000466205 USP17L15C9J2P7 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L13C9JLJ4 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L11C9JVI0 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L18D6R9N7 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L22D6RA61 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L17D6RBQ6 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L19D6RCP7 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L20D6RJB6 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 GSPT1P15170 499 aaKnown RBP12.14□□□□□ -0.47
CD40-204ENST00000466205 HOXA7P31268 230 aaPredicted RBP12.14□□□□□ -0.47
CD40-204ENST00000466205 USP17L24Q0WX57 530 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 SLC9C1Q4G0N8 1177 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 ZNF444Q8N0Y2 327 aaPredicted RBP12.14□□□□□ -0.47
CD40-204ENST00000466205 RAET1EQ8TD07 263 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 CHMP4CQ96CF2 233 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 C12orf42Q96LP6 360 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 CCDC17Q96LX7 622 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.14□□□□□ -0.47
CD40-204ENST00000466205 TANGO6Q9C0B7 1094 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 SRRDQ9UH36 339 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 ROBO3Q96MS0 1386 aa12.14□□□□□ -0.47
CD40-204ENST00000466205 HOXD10P28358 340 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
CD40-204ENST00000466205 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 Q3C1V9 767 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 POTEEQ6S8J3 1075 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 CATSPERGQ6ZRH7 1159 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 DIAPH3Q9NSV4 1193 aa12.13□□□□□ -0.47
CD40-204ENST00000466205 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 POTEFA5A3E0 1075 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 HSPD1P10809 573 aaKnown RBP12.12□□□□□ -0.47
CD40-204ENST00000466205 FLT3LGP49771 235 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 HAND2P61296 217 aa12.12□□□□□ -0.47
CD40-204ENST00000466205 RRP12Q5JTH9 1297 aaKnown RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms