RNA–Protein interactions for RNA: ENST00000464078.5

HMGN1-210, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 508 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-210ENST00000464078 ZNF236Q9UL36 1845 aa21.11■□□□□ 0.97
HMGN1-210ENST00000464078 DNAH12Q6ZR08 3092 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L15C9J2P7 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L13C9JLJ4 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L11C9JVI0 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L18D6R9N7 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L22D6RA61 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L17D6RBQ6 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L19D6RCP7 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L20D6RJB6 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 CNMDO75829 334 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 CCND3P30281 292 aaPredicted RBP21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP14P54578 494 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 USP17L24Q0WX57 530 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 MAP2K5Q13163 448 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 FEZ1Q99689 392 aa21.1■□□□□ 0.97
HMGN1-210ENST00000464078 TLR7Q9NYK1 1049 aaKnown RBP21.1■□□□□ 0.97
HMGN1-210ENST00000464078 DLL1O00548 723 aa21.09■□□□□ 0.97
HMGN1-210ENST00000464078 IDH1O75874 414 aaKnown RBP21.09■□□□□ 0.97
HMGN1-210ENST00000464078 GLRX3O76003 335 aaKnown RBP21.09■□□□□ 0.97
HMGN1-210ENST00000464078 DEFB123Q8N688 67 aa21.09■□□□□ 0.97
HMGN1-210ENST00000464078 EAF2Q96CJ1 260 aaPredicted RBP21.09■□□□□ 0.97
HMGN1-210ENST00000464078 UBE2OQ9C0C9 1292 aaKnown RBP21.09■□□□□ 0.97
HMGN1-210ENST00000464078 NAV1Q8NEY1 1877 aa21.09■□□□□ 0.97
HMGN1-210ENST00000464078 SLC15A5A6NIM6 579 aa21.08■□□□□ 0.97
HMGN1-210ENST00000464078 HOXC6P09630 235 aa21.08■□□□□ 0.97
HMGN1-210ENST00000464078 VCAM1P19320 739 aa21.08■□□□□ 0.97
HMGN1-210ENST00000464078 CATSPERGQ6ZRH7 1159 aa21.08■□□□□ 0.97
HMGN1-210ENST00000464078 MIGA1Q8NAN2 632 aa21.08■□□□□ 0.97
HMGN1-210ENST00000464078 A0A0G2JMZ2 1700 aa21.07■□□□□ 0.96
HMGN1-210ENST00000464078 USP5P45974 858 aa21.07■□□□□ 0.96
HMGN1-210ENST00000464078 LRRC26Q2I0M4 334 aa21.07■□□□□ 0.96
HMGN1-210ENST00000464078 TTC6Q86TZ1 520 aa21.07■□□□□ 0.96
HMGN1-210ENST00000464078 MAGEB6Q8N7X4 407 aa21.07■□□□□ 0.96
HMGN1-210ENST00000464078 EDC3Q96F86 508 aaKnown RBP21.07■□□□□ 0.96
HMGN1-210ENST00000464078 CWC22Q9HCG8 908 aaKnown RBP21.07■□□□□ 0.96
HMGN1-210ENST00000464078 MSCO60682 206 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 PTPREP23469 700 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 GRB14Q14449 540 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 ZYXQ15942 572 aaKnown RBP21.06■□□□□ 0.96
HMGN1-210ENST00000464078 ABCB5Q2M3G0 1257 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 CERKLQ49MI3 558 aaPredicted RBP21.06■□□□□ 0.96
HMGN1-210ENST00000464078 MFSD14CQ5VZR4 134 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 C1orf115Q9H7X2 142 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 STXBP5LQ9Y2K9 1186 aa21.06■□□□□ 0.96
HMGN1-210ENST00000464078 LAMA2P24043 3122 aaKnown RBP21.05■□□□□ 0.96
HMGN1-210ENST00000464078 IGHA2P01877 340 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 SHMT1P34896 483 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 MAP3K12Q12852 859 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 RAB3GAP1Q15042 981 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 CCDC8Q9H0W5 538 aaPredicted RBP21.05■□□□□ 0.96
HMGN1-210ENST00000464078 MTMR10Q9NXD2 777 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 FLRT1Q9NZU1 646 aa21.05■□□□□ 0.96
HMGN1-210ENST00000464078 SPDYE16A6NNV3 312 aaPredicted RBP21.04■□□□□ 0.96
HMGN1-210ENST00000464078 Q7L0L9 218 aa21.04■□□□□ 0.96
HMGN1-210ENST00000464078 ACER1Q8TDN7 264 aa21.04■□□□□ 0.96
HMGN1-210ENST00000464078 RIOK1Q9BRS2 568 aaKnown RBP21.04■□□□□ 0.96
HMGN1-210ENST00000464078 BTBD7Q9P203 1132 aa21.04■□□□□ 0.96
HMGN1-210ENST00000464078 IVNS1ABPQ9Y6Y0 642 aa21.04■□□□□ 0.96
HMGN1-210ENST00000464078 FTSJ3Q8IY81 847 aaKnown RBP21.03■□□□□ 0.96
HMGN1-210ENST00000464078 LPAR1Q92633 364 aa21.03■□□□□ 0.96
HMGN1-210ENST00000464078 ANTXR1Q9H6X2 564 aa21.03■□□□□ 0.96
HMGN1-210ENST00000464078 CABP5Q9NP86 173 aa21.03■□□□□ 0.96
HMGN1-210ENST00000464078 DDX20Q9UHI6 824 aaKnown RBP21.03■□□□□ 0.96
HMGN1-210ENST00000464078 RLFQ13129 1914 aa21.03■□□□□ 0.96
HMGN1-210ENST00000464078 LTBP2Q14767 1821 aa21.03■□□□□ 0.96
HMGN1-210ENST00000464078 GUCY1A2P33402 732 aa21.02■□□□□ 0.96
HMGN1-210ENST00000464078 GABPAQ06546 454 aa21.02■□□□□ 0.96
HMGN1-210ENST00000464078 ERC1Q8IUD2 1116 aa21.02■□□□□ 0.96
HMGN1-210ENST00000464078 RPAP3Q9H6T3 665 aaPredicted RBP21.02■□□□□ 0.96
HMGN1-210ENST00000464078 NDUFB9Q9Y6M9 179 aa21.02■□□□□ 0.96
HMGN1-210ENST00000464078 UNC80Q8N2C7 3258 aa21.02■□□□□ 0.96
HMGN1-210ENST00000464078 DNM1LO00429 736 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 RLBP1P12271 317 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 CYBAP13498 195 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 PLCD1P51178 756 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 WDR78Q5VTH9 848 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 CEP85Q6P2H3 762 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 ITPRIPQ8IWB1 547 aa21.01■□□□□ 0.95
HMGN1-210ENST00000464078 MDM2Q00987 491 aaPredicted RBP21■□□□□ 0.95
HMGN1-210ENST00000464078 ATP2B2Q01814 1243 aa21■□□□□ 0.95
HMGN1-210ENST00000464078 SEPT2Q15019 361 aa20.99■□□□□ 0.95
HMGN1-210ENST00000464078 TTF1Q15361 905 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-210ENST00000464078 OLFML2BQ68BL8 750 aa20.99■□□□□ 0.95
HMGN1-210ENST00000464078 FAM109BQ6ICB4 259 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-210ENST00000464078 AACSQ86V21 672 aa20.99■□□□□ 0.95
HMGN1-210ENST00000464078 SHCBP1Q8NEM2 672 aa20.99■□□□□ 0.95
HMGN1-210ENST00000464078 NPLOC4Q8TAT6 608 aa20.99■□□□□ 0.95
HMGN1-210ENST00000464078 SENP6Q9GZR1 1112 aaPredicted RBP20.99■□□□□ 0.95
HMGN1-210ENST00000464078 MYH8P13535 1937 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 MAGEB6P1A0A0J9YX57 407 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 STRNO43815 780 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 CYP2C19P33261 490 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 COG2Q14746 738 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 TRPV1Q8NER1 839 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 LBHD1Q9BQE6 289 aaPredicted RBP20.98■□□□□ 0.95
HMGN1-210ENST00000464078 MOV10L1Q9BXT6 1211 aaKnown RBP20.98■□□□□ 0.95
HMGN1-210ENST00000464078 CRNKL1Q9BZJ0 848 aaKnown RBP20.98■□□□□ 0.95
HMGN1-210ENST00000464078 PARP14Q460N5 1801 aa20.98■□□□□ 0.95
HMGN1-210ENST00000464078 A0A1W2PRG0 241 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms