RNA–Protein interactions for RNA: ENST00000463097.1

COPS3-205, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 288 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-205ENST00000463097 WASHC2CQ9Y4E1 1318 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 DNAJC25-GNG10A0A024R161 153 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 LOC102724159A0A0B4J2E5 919 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 RGS13O14921 159 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 AOC2O75106 756 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 TP53P04637 393 aaPredicted RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 MAP2K3P46734 347 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 AFF1P51825 1210 aaKnown RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 TBX4P57082 545 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 ERVK-24P63145 666 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 PPP2R2AP63151 447 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 PWP2Q15269 919 aaKnown RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 SLC6A19Q695T7 634 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 WWC2Q6AWC2 1192 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 CNNM4Q6P4Q7 775 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 LRRTM3Q86VH5 581 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 RAVER1Q8IY67 606 aaKnown RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 AFAP1L2Q8N4X5 818 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 TMEM87BQ96K49 555 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 C8orf48Q96LL4 319 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 PICK1Q9NRD5 415 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 GGA1Q9UJY5 639 aa7.78□□□□□ -1.16
COPS3-205ENST00000463097 GDF2Q9UK05 429 aaPredicted RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 NSFL1CQ9UNZ2 370 aaKnown RBP7.78□□□□□ -1.16
COPS3-205ENST00000463097 LOC100289279A0A1B0GTE1 492 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 FANCGO15287 622 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 ALDH1L1O75891 902 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 EPHX1P07099 455 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 SDSP20132 328 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 NLRP12P59046 1061 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 PPM1JQ5JR12 505 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 ZBTB37Q5TC79 503 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 TDRD10Q5VZ19 366 aaKnown RBP7.77□□□□□ -1.17
COPS3-205ENST00000463097 HEATR6Q6AI08 1181 aaKnown RBP7.77□□□□□ -1.17
COPS3-205ENST00000463097 WFDC8Q8IUA0 241 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 HID1Q8IV36 788 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 CCAR1Q8IX12 1150 aaKnown RBP7.77□□□□□ -1.17
COPS3-205ENST00000463097 MRPL41Q8IXM3 137 aaKnown RBP7.77□□□□□ -1.17
COPS3-205ENST00000463097 CCDC146Q8IYE0 955 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 LRRN4CLQ8ND94 238 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 CCDC74BQ96LY2 380 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 HAUS7Q99871 368 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
COPS3-205ENST00000463097 TM4SF5O14894 197 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 PRC1O43663 620 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 PEX14O75381 377 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 UBOX5O94941 541 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 ITGAVP06756 1048 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 FGFR1P11362 822 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 SUMO1P63165 101 aaKnown RBP7.76□□□□□ -1.17
COPS3-205ENST00000463097 MAP7Q14244 749 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 GAS6Q14393 721 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 AXDND1Q5T1B0 1012 aaPredicted RBP7.76□□□□□ -1.17
COPS3-205ENST00000463097 DDX46Q7L014 1031 aaKnown RBP7.76□□□□□ -1.17
COPS3-205ENST00000463097 ZNF507Q8TCN5 953 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 DDX1Q92499 740 aaKnown RBP7.76□□□□□ -1.17
COPS3-205ENST00000463097 SMARCC1Q92922 1105 aaPredicted RBP7.76□□□□□ -1.17
COPS3-205ENST00000463097 PPP1R14AQ96A00 147 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 MYH16Q9H6N6 1097 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 RAD18Q9NS91 495 aa7.76□□□□□ -1.17
COPS3-205ENST00000463097 C9IYK1 514 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 PRODHO43272 600 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 LILRB5O75023 590 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 DLGAP3O95886 979 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 ALBP02768 609 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 CPEP16870 476 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 GBP1P32455 592 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 GUCY2FP51841 1108 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 EPHB1P54762 984 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 ID3Q02535 119 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 TTF1Q15361 905 aaPredicted RBP7.75□□□□□ -1.17
COPS3-205ENST00000463097 MSL1Q68DK7 614 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 NSMFQ6X4W1 530 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 STRA8Q7Z7C7 330 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 RIN3Q8TB24 985 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 KLHL25Q9H0H3 589 aa7.75□□□□□ -1.17
COPS3-205ENST00000463097 CLEC3AO75596 197 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 EYA4O95677 639 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 CAPNS1P04632 268 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 PABPC1P11940 636 aaKnown RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 SNRPBP14678 240 aaKnown RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 SETDB1Q15047 1291 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 NFE2Q16621 373 aaPredicted RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 ZNF227Q86WZ6 799 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 AHI1Q8N157 1196 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 PPM1KQ8N3J5 372 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 ZNF513Q8N8E2 541 aaPredicted RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 GALNT11Q8NCW6 608 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 TSR2Q969E8 191 aaKnown RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 FGD4Q96M96 766 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.74□□□□□ -1.17
COPS3-205ENST00000463097 MBIPQ9NS73 344 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 GMPR2Q9P2T1 348 aaKnown RBP7.74□□□□□ -1.17
COPS3-205ENST00000463097 APEX2Q9UBZ4 518 aa7.74□□□□□ -1.17
COPS3-205ENST00000463097 SPDYE3A6NKU9 549 aa7.73□□□□□ -1.17
COPS3-205ENST00000463097 DDX3YO15523 660 aaKnown RBP7.73□□□□□ -1.17
COPS3-205ENST00000463097 CBFA2T2O43439 604 aa7.73□□□□□ -1.17
COPS3-205ENST00000463097 DNAJC8O75937 253 aaPredicted RBP7.73□□□□□ -1.17
COPS3-205ENST00000463097 GRIA2P42262 883 aa7.73□□□□□ -1.17
COPS3-205ENST00000463097 TRIM61Q5EBN2 209 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms