RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 CCDC129Q6ZRS4 1044 aa22.15■■□□□ 1.14
CDKN1A-206ENST00000462537 TMEM179Q6ZVK1 233 aa22.15■■□□□ 1.14
CDKN1A-206ENST00000462537 OSBPL3Q9H4L5 887 aa22.15■■□□□ 1.14
CDKN1A-206ENST00000462537 BCRP11274 1271 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 AKR1B1P15121 316 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 GUCY1A2P33402 732 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 USP14P54578 494 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 IFNL3Q8IZI9 196 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 ASCC2Q9H1I8 757 aaPredicted RBP22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 PTPN22Q9Y2R2 807 aa22.14■■□□□ 1.13
CDKN1A-206ENST00000462537 PSMC4P43686 418 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 ACER1Q8TDN7 264 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 CCDC17Q96LX7 622 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 NAPBQ9H115 298 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 MKNK2Q9HBH9 465 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 HELLSQ9NRZ9 838 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 EMILIN3Q9NT22 766 aa22.13■■□□□ 1.13
CDKN1A-206ENST00000462537 FMNL1O95466 1100 aaPredicted RBP22.12■■□□□ 1.13
CDKN1A-206ENST00000462537 ANKRD13CQ8N6S4 541 aa22.12■■□□□ 1.13
CDKN1A-206ENST00000462537 FAM227BQ96M60 508 aa22.12■■□□□ 1.13
CDKN1A-206ENST00000462537 KIAA1683Q9H0B3 1180 aa22.12■■□□□ 1.13
CDKN1A-206ENST00000462537 ROBO3Q96MS0 1386 aa22.12■■□□□ 1.13
CDKN1A-206ENST00000462537 MGAMO43451 1857 aa22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 A0A0D9SFI3 127 aa22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 ICA1Q05084 483 aa22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 NMIQ13287 307 aaPredicted RBP22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 TICAM2Q86XR7 235 aa22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 CLEC10AQ8IUN9 316 aa22.11■■□□□ 1.13
CDKN1A-206ENST00000462537 GNRH1P01148 92 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 PDE4AP27815 886 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 HOXA7P31268 230 aaPredicted RBP22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 GCLCP48506 637 aaPredicted RBP22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 MCMDC2Q4G0Z9 681 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 TRIM47Q96LD4 638 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 C12orf42Q96LP6 360 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 ARHGEF10LQ9HCE6 1279 aa22.1■■□□□ 1.13
CDKN1A-206ENST00000462537 CTGFP29279 349 aa22.09■■□□□ 1.13
CDKN1A-206ENST00000462537 FCGRTP55899 365 aa22.09■■□□□ 1.13
CDKN1A-206ENST00000462537 ATP2B2Q01814 1243 aa22.09■■□□□ 1.13
CDKN1A-206ENST00000462537 P2RX7Q99572 595 aaKnown RBP22.09■■□□□ 1.13
CDKN1A-206ENST00000462537 ZNF287Q9HBT7 754 aa22.09■■□□□ 1.13
CDKN1A-206ENST00000462537 A0A1W2PRG0 241 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 SLC3A2P08195 630 aaKnown RBP22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 VCAM1P19320 739 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 SDSP20132 328 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 RASA1P20936 1047 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 HOXD10P28358 340 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 VPS53Q5VIR6 699 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 SH2D4AQ9H788 454 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 DIAPH3Q9NSV4 1193 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 PTCH2Q9Y6C5 1203 aa22.08■■□□□ 1.13
CDKN1A-206ENST00000462537 USP17L15C9J2P7 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L13C9JLJ4 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L11C9JVI0 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L18D6R9N7 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L22D6RA61 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L17D6RBQ6 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L19D6RCP7 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L20D6RJB6 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 PRDM1O75626 825 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 HERVK_113P62684 666 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 PDE4BQ07343 736 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 PPARAQ07869 468 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 USP17L24Q0WX57 530 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 FAM110CQ1W6H9 321 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 KANSL2Q9H9L4 492 aa22.07■■□□□ 1.12
CDKN1A-206ENST00000462537 FOXP2O15409 715 aa22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 PRMT2P55345 433 aa22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 ZNF444Q8N0Y2 327 aaPredicted RBP22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 RPAP3Q9H6T3 665 aaPredicted RBP22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 SRRDQ9UH36 339 aa22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 CCDC171Q6TFL3 1326 aa22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 MYPNQ86TC9 1320 aa22.06■■□□□ 1.12
CDKN1A-206ENST00000462537 HIP1O00291 1037 aa22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 TNPO2O14787 897 aaKnown RBP22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 EEF2P13639 858 aaKnown RBP22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 MFAP1P55081 439 aaKnown RBP22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 SOX10P56693 466 aa22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 SLC9C1Q4G0N8 1177 aa22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 TTC22Q5TAA0 569 aa22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 ZNF589Q86UQ0 364 aaPredicted RBP22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 GREB1LQ9C091 1923 aaPredicted RBP22.05■■□□□ 1.12
CDKN1A-206ENST00000462537 RAD21O60216 631 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 CWC27Q6UX04 472 aaKnown RBP22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 CATSPERGQ6ZRH7 1159 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 SIAH1Q8IUQ4 282 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 RAET1EQ8TD07 263 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 GTF3C2Q8WUA4 911 aaPredicted RBP22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 PAGR1Q9BTK6 254 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 TANGO6Q9C0B7 1094 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 TMX2Q9Y320 296 aa22.04■■□□□ 1.12
CDKN1A-206ENST00000462537 PRKCZQ05513 592 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 CTDSPL2Q05D32 466 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 NBPF11Q86T75 865 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 SPICE1Q8N0Z3 855 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 COA7Q96BR5 231 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 MORF4L1Q9UBU8 362 aa22.03■■□□□ 1.12
CDKN1A-206ENST00000462537 PEX10O60683 326 aa22.02■■□□□ 1.12
CDKN1A-206ENST00000462537 TSPY3P0CV98 308 aa22.02■■□□□ 1.12
CDKN1A-206ENST00000462537 TSPY8P0CW00 308 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms