RNA–Protein interactions for RNA: ENST00000462473.1

SLC6A1-204, Transcript of solute carrier family 6 member 1, humanhuman

TSL 3

Gene SLC6A1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A1-204ENST00000462473 PTCH2Q9Y6C5 1203 aa22.63■■□□□ 1.21
SLC6A1-204ENST00000462473 GCLCP48506 637 aaPredicted RBP22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 PRMT2P55345 433 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 FCGRTP55899 365 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 TMEM179Q6ZVK1 233 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 C16orf86Q6ZW13 317 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 ACER1Q8TDN7 264 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 CCDC17Q96LX7 622 aa22.62■■□□□ 1.21
SLC6A1-204ENST00000462473 LOC285556D6RIA3 1793 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 MINDY4BA8MYZ0 360 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 PATL2C9JE40 543 aaKnown RBP22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 TDO2P48775 406 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 SBK1Q52WX2 424 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 KIAA1683Q9H0B3 1180 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 SRRDQ9UH36 339 aa22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 BAZ2AQ9UIF9 1905 aaKnown RBP22.61■■□□□ 1.21
SLC6A1-204ENST00000462473 AKR1B1P15121 316 aa22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 FAM110CQ1W6H9 321 aa22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 IFNL3Q8IZI9 196 aa22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 C12orf42Q96LP6 360 aa22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 P2RX7Q99572 595 aaKnown RBP22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 NACAP1Q9BZK3 213 aa22.6■■□□□ 1.21
SLC6A1-204ENST00000462473 TRIM6-TRIM34B2RNG4 842 aa22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 SLC9C1Q4G0N8 1177 aa22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 NBPF11Q86T75 865 aa22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 PLEKHM2Q8IWE5 1019 aa22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 STK11IPQ8N1F8 1099 aa22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 EPB41L4AQ9HCS5 686 aaPredicted RBP22.59■■□□□ 1.21
SLC6A1-204ENST00000462473 RGS19P49795 217 aa22.58■■□□□ 1.21
SLC6A1-204ENST00000462473 RAET1EQ8TD07 263 aa22.58■■□□□ 1.21
SLC6A1-204ENST00000462473 RILPL2Q969X0 211 aa22.58■■□□□ 1.21
SLC6A1-204ENST00000462473 MYPNQ86TC9 1320 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 ZSWIM8A7E2V4 1837 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L15C9J2P7 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L13C9JLJ4 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L11C9JVI0 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L18D6R9N7 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L22D6RA61 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L17D6RBQ6 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L19D6RCP7 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L20D6RJB6 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 TNPO2O14787 897 aaKnown RBP22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 HERVK_113P62684 666 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 USP17L24Q0WX57 530 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 ARMC5Q96C12 935 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 OSBPL3Q9H4L5 887 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 MKNK2Q9HBH9 465 aa22.57■■□□□ 1.2
SLC6A1-204ENST00000462473 A0A1W2PRG0 241 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 VCAM1P19320 739 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 ICA1Q05084 483 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 CCDC129Q6ZRS4 1044 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 NAPBQ9H115 298 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 ARHGEF10LQ9HCE6 1279 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 HELLSQ9NRZ9 838 aa22.56■■□□□ 1.2
SLC6A1-204ENST00000462473 MLLT1Q03111 559 aaPredicted RBP22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 PRKCZQ05513 592 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 CATSPERGQ6ZRH7 1159 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 TICAM2Q86XR7 235 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 CLEC10AQ8IUN9 316 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 GTF3C2Q8WUA4 911 aaPredicted RBP22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 COA7Q96BR5 231 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 ZNF287Q9HBT7 754 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 MORF4L1Q9UBU8 362 aa22.55■■□□□ 1.2
SLC6A1-204ENST00000462473 ATP2B2Q01814 1243 aa22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 SH3TC2Q8TF17 1288 aa22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 RPAP3Q9H6T3 665 aaPredicted RBP22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 SH2D4AQ9H788 454 aa22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 KANSL2Q9H9L4 492 aa22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 GABRQQ9UN88 632 aa22.54■■□□□ 1.2
SLC6A1-204ENST00000462473 ROBO3Q96MS0 1386 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 RASA1P20936 1047 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 SIAH1Q8IUQ4 282 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 GPRC5AQ8NFJ5 357 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 ZNF333Q96JL9 665 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 PAGR1Q9BTK6 254 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 TXNRD2Q9NNW7 524 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 RBPJLQ9UBG7 517 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 TMX2Q9Y320 296 aa22.53■■□□□ 1.2
SLC6A1-204ENST00000462473 SLC3A2P08195 630 aaKnown RBP22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 EEF2P13639 858 aaKnown RBP22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 GRK4P32298 578 aa22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 FLT3LGP49771 235 aa22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 MCMDC2Q4G0Z9 681 aa22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 ZNF444Q8N0Y2 327 aaPredicted RBP22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 FAM227BQ96M60 508 aa22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 TMEM106CQ9BVX2 250 aa22.52■■□□□ 1.2
SLC6A1-204ENST00000462473 A0A0D9SFI3 127 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 PEX10O60683 326 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 PRDM1O75626 825 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 MYCP01106 439 aaPredicted RBP22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 PDE4BQ07343 736 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 PPARAQ07869 468 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 NMIQ13287 307 aaPredicted RBP22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 MYH8P13535 1937 aa22.51■■□□□ 1.19
SLC6A1-204ENST00000462473 ERVK-9P63128 1117 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 ERVK-24P63145 666 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 Q3C1V9 767 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 VPS53Q5VIR6 699 aa22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 CCAR1Q8IX12 1150 aaKnown RBP22.5■■□□□ 1.19
SLC6A1-204ENST00000462473 LPAR1Q92633 364 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms