RNA–Protein interactions for RNA: ENST00000461855.3

SPTAN1-204, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 857 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-204ENST00000461855 PABPC4Q13310 644 aaKnown RBP eCLIP12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 RAB3GAP1Q15042 981 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 TTC22Q5TAA0 569 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 VPS53Q5VIR6 699 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 FBXO46Q6PJ61 603 aaPredicted RBP12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 CD99L2Q8TCZ2 262 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 ACER1Q8TDN7 264 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 NACAP1Q9BZK3 213 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 CPA4Q9UI42 421 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 ANAPC4Q9UJX5 808 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 PNMA3Q9UL41 463 aa12.15□□□□□ -0.46
SPTAN1-204ENST00000461855 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 IGKV6D-41A0A0C4DH26 115 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 FGRP09769 529 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 CTGFP29279 349 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 TDO2P48775 406 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 USP14P54578 494 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 POTEEQ6S8J3 1075 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 ZNF589Q86UQ0 364 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 RILPL2Q969X0 211 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 ASCC2Q9H1I8 757 aaPredicted RBP12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 EFCC1Q9HA90 598 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 TMOD4Q9NZQ9 345 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 PTPN22Q9Y2R2 807 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 TMX2Q9Y320 296 aa12.14□□□□□ -0.47
SPTAN1-204ENST00000461855 MINDY4BA8MYZ0 360 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 HIP1O00291 1037 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 APPP05067 770 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 HSPD1P10809 573 aaKnown RBP12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 OSBPP22059 807 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 GCLCP48506 637 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 PPARAQ07869 468 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 ARHGEF6Q15052 776 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 FAM110CQ1W6H9 321 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 LBX2Q6XYB7 198 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 CENPQQ7L2Z9 268 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 ARHGAP39Q9C0H5 1083 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 NAPBQ9H115 298 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 KANSL2Q9H9L4 492 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 MORF4L1Q9UBU8 362 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 TRIM17Q9Y577 477 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 ZSWIM8A7E2V4 1837 aa12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 GREB1LQ9C091 1923 aaPredicted RBP12.13□□□□□ -0.47
SPTAN1-204ENST00000461855 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 FGAP02671 866 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 VCAM1P19320 739 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 PRMT2P55345 433 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 CATSPERGQ6ZRH7 1159 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 P2RX7Q99572 595 aaKnown RBP12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 ZNF287Q9HBT7 754 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 HPS5Q9UPZ3 1129 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 TACC3Q9Y6A5 838 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 PLIN4Q96Q06 1357 aa12.12□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L15C9J2P7 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L13C9JLJ4 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L11C9JVI0 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L18D6R9N7 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L22D6RA61 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L17D6RBQ6 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L19D6RCP7 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L20D6RJB6 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 MPHOSPH10O00566 681 aaKnown RBP12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 NOVP48745 357 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 HERVK_113P62684 666 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 ICA1Q05084 483 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 USP17L24Q0WX57 530 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 KIAA1755Q5JYT7 1200 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 NEDD1Q8NHV4 660 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 SMCR8Q8TEV9 937 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 GTF3C2Q8WUA4 911 aaPredicted RBP12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 LPAR1Q92633 364 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 MKL1Q969V6 931 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 TRIM47Q96LD4 638 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 MKNK2Q9HBH9 465 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 RBPJLQ9UBG7 517 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 SYNPO2Q9UMS6 1093 aa12.11□□□□□ -0.47
SPTAN1-204ENST00000461855 ORC4O43929 436 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 EEF2P13639 858 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 PSMC4P43686 418 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 MFAP1P55081 439 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 PDE4BQ07343 736 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 KIF22Q14807 665 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 CWC27Q6UX04 472 aaKnown RBP12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 CLEC10AQ8IUN9 316 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 ARMC5Q96C12 935 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 FEZ1Q99689 392 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 IL25Q9H293 177 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 VCPKMTQ9H867 229 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 ARHGEF10LQ9HCE6 1279 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 TXNRD2Q9NNW7 524 aa12.1□□□□□ -0.47
SPTAN1-204ENST00000461855 PRDM1O75626 825 aa12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 SLC3A2P08195 630 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 PCP11498 1178 aaKnown RBP12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 CHMLP26374 656 aa12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 RGS19P49795 217 aa12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 IRX3P78415 501 aaPredicted RBP12.09□□□□□ -0.47
SPTAN1-204ENST00000461855 ZYXQ15942 572 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms