RNA–Protein interactions for RNA: ENST00000460569.1

UPF2-204, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF2, Length 640 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-204ENST00000460569 UPF3BQ9BZI7 483 aaKnown RBP11.98□□□□□ -0.49
UPF2-204ENST00000460569 TM6SF1Q9BZW5 370 aa11.98□□□□□ -0.49
UPF2-204ENST00000460569 CYP46A1Q9Y6A2 500 aa11.98□□□□□ -0.49
UPF2-204ENST00000460569 TLL2Q9Y6L7 1015 aa11.98□□□□□ -0.49
UPF2-204ENST00000460569 IGKV6D-41A0A0C4DH26 115 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 ERICH2A1L162 156 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 SPDYE5A6NIY4 337 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 UNCXA6NJT0 531 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 IFIT3O14879 490 aaKnown RBP11.97□□□□□ -0.49
UPF2-204ENST00000460569 RPS6KB1P23443 525 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 FGD1P98174 961 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 CCDC178Q5BJE1 867 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 TMEM67Q5HYA8 995 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 PPP4R3BQ5MIZ7 849 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 RUFY3Q7L099 469 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 DHX32Q7L7V1 743 aaKnown RBP11.97□□□□□ -0.49
UPF2-204ENST00000460569 ERO1BQ86YB8 467 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 CNKSR2Q8WXI2 1034 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 OPTNQ96CV9 577 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 SLC10A4Q96EP9 437 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 IL17RAQ96F46 866 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 OTUD5Q96G74 571 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 ZSCAN10Q96SZ4 725 aaPredicted RBP11.97□□□□□ -0.49
UPF2-204ENST00000460569 LRRC2Q9BYS8 371 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 KANSL2Q9H9L4 492 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 AS3MTQ9HBK9 375 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 ARHGEF10LQ9HCE6 1279 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 ZSWIM6Q9HCJ5 1215 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 IL17RBQ9NRM6 502 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 TCP11L1Q9NUJ3 509 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 MTMR4Q9NYA4 1195 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 STX8Q9UNK0 236 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 ZHX2Q9Y6X8 837 aa11.97□□□□□ -0.49
UPF2-204ENST00000460569 WDR19Q8NEZ3 1342 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 TTLL1O95922 423 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 EEF2P13639 858 aaKnown RBP11.96□□□□□ -0.49
UPF2-204ENST00000460569 WTAPQ15007 396 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 PAXIP1Q6ZW49 1069 aaPredicted RBP11.96□□□□□ -0.49
UPF2-204ENST00000460569 LRRC47Q8N1G4 583 aaKnown RBP11.96□□□□□ -0.49
UPF2-204ENST00000460569 ENAHQ8N8S7 591 aaPredicted RBP11.96□□□□□ -0.49
UPF2-204ENST00000460569 WNK4Q96J92 1243 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 TMEM87BQ96K49 555 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 KIF2CQ99661 725 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 FEZ1Q99689 392 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 CREBZFQ9NS37 354 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 LOC285556D6RIA3 1793 aa11.96□□□□□ -0.49
UPF2-204ENST00000460569 TRIM75PA6NK02 468 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 SH2B2O14492 632 aaPredicted RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 ZNF157P51786 506 aaPredicted RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 EXOSC10Q01780 885 aaKnown RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 PPATQ06203 517 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 PPIL2Q13356 520 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 RABEP1Q15276 862 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 ZYXQ15942 572 aaKnown RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 IFIT1BQ5T764 474 aaKnown RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 RGMBQ6NW40 437 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 Q6ZUG5 572 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 RASAL3Q86YV0 1011 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 ZNF280CQ8ND82 737 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 ACER1Q8TDN7 264 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 MTA3Q9BTC8 594 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 SH2D4AQ9H788 454 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 GPHNQ9NQX3 736 aaPredicted RBP11.95□□□□□ -0.5
UPF2-204ENST00000460569 PDRG1Q9NUG6 133 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 NYAP2Q9P242 653 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 CLIP2Q9UDT6 1046 aa11.95□□□□□ -0.5
UPF2-204ENST00000460569 A0A1W2PRG0 241 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 RAD21O60216 631 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 TOP1P11387 765 aaKnown RBP11.94□□□□□ -0.5
UPF2-204ENST00000460569 GJA5P36382 358 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 ECE1P42892 770 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 NEK4P51957 841 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 MKRN3Q13064 507 aaKnown RBP11.94□□□□□ -0.5
UPF2-204ENST00000460569 SPP2Q13103 211 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 MTMR2Q13614 643 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 SEC23AQ15436 765 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 RCSD1Q6JBY9 416 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 NFXL1Q6ZNB6 911 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 DGKHQ86XP1 1220 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 IGDCC4Q8TDY8 1250 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 HHIPL1Q96JK4 782 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 TTC14Q96N46 770 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 WDR18Q9BV38 432 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 KAT14Q9H8E8 782 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 LY9Q9HBG7 655 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 AFG3L2Q9Y4W6 797 aa11.94□□□□□ -0.5
UPF2-204ENST00000460569 CCDC69A6NI79 296 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 USP17L10C9JJH3 530 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 IRF6O14896 467 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 SLC10A3P09131 477 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 NOVP48745 357 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 C1QTNF8P60827 252 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 GRM1Q13255 1194 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 SPRYD7Q5W111 196 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 SIAH1Q8IUQ4 282 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 PNMA1Q8ND90 353 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 BRF1Q92994 677 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 TMEM47Q9BQJ4 181 aa11.93□□□□□ -0.5
UPF2-204ENST00000460569 SENP2Q9HC62 589 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms