RNA–Protein interactions for RNA: ENST00000460431.1

SMARCD3-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-204ENST00000460431 TDO2P48775 406 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 LACTBP83111 547 aaPredicted RBP19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 PABPC4Q13310 644 aaKnown RBP eCLIP19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 MCMDC2Q4G0Z9 681 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 CCDC129Q6ZRS4 1044 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 TMEM179Q6ZVK1 233 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 FAM227BQ96M60 508 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 ARHGAP39Q9C0H5 1083 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 EMILIN3Q9NT22 766 aa19.67■□□□□ 0.74
SMARCD3-204ENST00000460431 A0A0D9SFI3 127 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 FOXP2O15409 715 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 BCRP11274 1271 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 AKR1B1P15121 316 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 SDSP20132 328 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 HOXA7P31268 230 aaPredicted RBP19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 USP17L2Q6R6M4 530 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 ACER1Q8TDN7 264 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 KIAA1683Q9H0B3 1180 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 PNMA3Q9UL41 463 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 PTCH2Q9Y6C5 1203 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 ROBO3Q96MS0 1386 aa19.66■□□□□ 0.74
SMARCD3-204ENST00000460431 USP14P54578 494 aa19.65■□□□□ 0.74
SMARCD3-204ENST00000460431 NMIQ13287 307 aaPredicted RBP19.65■□□□□ 0.74
SMARCD3-204ENST00000460431 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
SMARCD3-204ENST00000460431 NAPBQ9H115 298 aa19.65■□□□□ 0.74
SMARCD3-204ENST00000460431 MGAMO43451 1857 aa19.65■□□□□ 0.74
SMARCD3-204ENST00000460431 DOCK3Q8IZD9 2030 aa19.64■□□□□ 0.74
SMARCD3-204ENST00000460431 OSBPP22059 807 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 CTGFP29279 349 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 SIAH1Q8IUQ4 282 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 SMCR8Q8TEV9 937 aaPredicted RBP19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 ZNF333Q96JL9 665 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 FEZ1Q99689 392 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 ASCC2Q9H1I8 757 aaPredicted RBP19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 ZSWIM8A7E2V4 1837 aa19.64■□□□□ 0.73
SMARCD3-204ENST00000460431 GREB1LQ9C091 1923 aaPredicted RBP19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 A0A1W2PRG0 241 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 KIF22Q14807 665 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 ALX1Q15699 326 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 TTC22Q5TAA0 569 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 MKNK2Q9HBH9 465 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 PDE4DIPQ5VU43 2346 aa19.63■□□□□ 0.73
SMARCD3-204ENST00000460431 HIP1O00291 1037 aa19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 GNRH1P01148 92 aa19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 RASA1P20936 1047 aa19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 GCLCP48506 637 aaPredicted RBP19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 ZYXQ15942 572 aaKnown RBP19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 ZNF589Q86UQ0 364 aaPredicted RBP19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 STK11IPQ8N1F8 1099 aa19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 ZNF287Q9HBT7 754 aa19.62■□□□□ 0.73
SMARCD3-204ENST00000460431 SLC34A2O95436 690 aa19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 GSPT1P15170 499 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 PPARAQ07869 468 aa19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 SLC9C1Q4G0N8 1177 aa19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 PRPF38BQ5VTL8 546 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 P2RX7Q99572 595 aaKnown RBP19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 KANSL2Q9H9L4 492 aa19.61■□□□□ 0.73
SMARCD3-204ENST00000460431 CCDC171Q6TFL3 1326 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 SLC3A2P08195 630 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 HSPD1P10809 573 aaKnown RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 EN2P19622 333 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 PSMC4P43686 418 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 IRX3P78415 501 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 ICA1Q05084 483 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 CENPQQ7L2Z9 268 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 NBPF11Q86T75 865 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 CLEC10AQ8IUN9 316 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 ZNF444Q8N0Y2 327 aaPredicted RBP19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 ANKRD13CQ8N6S4 541 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 TRIM47Q96LD4 638 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 ARHGEF10LQ9HCE6 1279 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 DIAPH3Q9NSV4 1193 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 TMX2Q9Y320 296 aa19.6■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L15C9J2P7 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L13C9JLJ4 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L11C9JVI0 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L18D6R9N7 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L22D6RA61 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L17D6RBQ6 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L19D6RCP7 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L20D6RJB6 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 ECM2O94769 699 aaPredicted RBP19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 FGAP02671 866 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 VCAM1P19320 739 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 MFAP1P55081 439 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 PRMT2P55345 433 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 PDE4BQ07343 736 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 USP17L24Q0WX57 530 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 FAM110CQ1W6H9 321 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 CWC27Q6UX04 472 aaKnown RBP19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 ANAPC4Q9UJX5 808 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 CENPFP49454 3210 aa19.59■□□□□ 0.73
SMARCD3-204ENST00000460431 PRDM1O75626 825 aa19.58■□□□□ 0.72
SMARCD3-204ENST00000460431 EEF2P13639 858 aaKnown RBP19.58■□□□□ 0.72
SMARCD3-204ENST00000460431 HERVK_113P62684 666 aa19.58■□□□□ 0.72
SMARCD3-204ENST00000460431 CATSPERGQ6ZRH7 1159 aa19.58■□□□□ 0.72
SMARCD3-204ENST00000460431 SH3TC2Q8TF17 1288 aa19.58■□□□□ 0.72
SMARCD3-204ENST00000460431 TMEM106CQ9BVX2 250 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms