RNA–Protein interactions for RNA: ENST00000460050.1

THBS3-204, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 879 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-204ENST00000460050 ASCC2Q9H1I8 757 aaPredicted RBP17.07■□□□□ 0.32
THBS3-204ENST00000460050 EMILIN3Q9NT22 766 aa17.07■□□□□ 0.32
THBS3-204ENST00000460050 PTPN22Q9Y2R2 807 aa17.07■□□□□ 0.32
THBS3-204ENST00000460050 MINDY4BA8MYZ0 360 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 PATL2C9JE40 543 aaKnown RBP17.06■□□□□ 0.32
THBS3-204ENST00000460050 AKR1B1P15121 316 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 OSBPP22059 807 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 CCDC129Q6ZRS4 1044 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 RILPL2Q969X0 211 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 CCDC17Q96LX7 622 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 KIAA1683Q9H0B3 1180 aa17.06■□□□□ 0.32
THBS3-204ENST00000460050 MGAMO43451 1857 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 ROBO3Q96MS0 1386 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 CTGFP29279 349 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 HOXA7P31268 230 aaPredicted RBP17.05■□□□□ 0.32
THBS3-204ENST00000460050 PSMC4P43686 418 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 IRX3P78415 501 aaPredicted RBP17.05■□□□□ 0.32
THBS3-204ENST00000460050 IFNL3Q8IZI9 196 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 TRIM47Q96LD4 638 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 C12orf42Q96LP6 360 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 NACAP1Q9BZK3 213 aa17.05■□□□□ 0.32
THBS3-204ENST00000460050 FMNL1O95466 1100 aaPredicted RBP17.04■□□□□ 0.32
THBS3-204ENST00000460050 GCLCP48506 637 aaPredicted RBP17.04■□□□□ 0.32
THBS3-204ENST00000460050 USP14P54578 494 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 TICAM2Q86XR7 235 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 CLEC10AQ8IUN9 316 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 STK11IPQ8N1F8 1099 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 ANKRD13CQ8N6S4 541 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 FAM227BQ96M60 508 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 NAPBQ9H115 298 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 HELLSQ9NRZ9 838 aa17.04■□□□□ 0.32
THBS3-204ENST00000460050 A0A0D9SFI3 127 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 A0A1W2PRG0 241 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 FOXP2O15409 715 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 GNRH1P01148 92 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 PDE4AP27815 886 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 FAM110CQ1W6H9 321 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 PTCH2Q9Y6C5 1203 aa17.03■□□□□ 0.32
THBS3-204ENST00000460050 GREB1LQ9C091 1923 aaPredicted RBP17.02■□□□□ 0.32
THBS3-204ENST00000460050 VCAM1P19320 739 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 RASA1P20936 1047 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 FCGRTP55899 365 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 HERVK_113P62684 666 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 ICA1Q05084 483 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 NMIQ13287 307 aaPredicted RBP17.02■□□□□ 0.32
THBS3-204ENST00000460050 P2RX7Q99572 595 aaKnown RBP17.02■□□□□ 0.32
THBS3-204ENST00000460050 MKNK2Q9HBH9 465 aa17.02■□□□□ 0.32
THBS3-204ENST00000460050 USP17L15C9J2P7 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L13C9JLJ4 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L11C9JVI0 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L18D6R9N7 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L22D6RA61 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L17D6RBQ6 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L19D6RCP7 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L20D6RJB6 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 HOXD10P28358 340 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 PRMT2P55345 433 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 SOX10P56693 466 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 USP17L24Q0WX57 530 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 MCMDC2Q4G0Z9 681 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 VPS53Q5VIR6 699 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 SIAH1Q8IUQ4 282 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 ARHGEF10LQ9HCE6 1279 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 SRRDQ9UH36 339 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 DOCK3Q8IZD9 2030 aa17.01■□□□□ 0.31
THBS3-204ENST00000460050 SDSP20132 328 aa17■□□□□ 0.31
THBS3-204ENST00000460050 ZNF589Q86UQ0 364 aaPredicted RBP17■□□□□ 0.31
THBS3-204ENST00000460050 RPAP3Q9H6T3 665 aaPredicted RBP17■□□□□ 0.31
THBS3-204ENST00000460050 SH2D4AQ9H788 454 aa17■□□□□ 0.31
THBS3-204ENST00000460050 KANSL2Q9H9L4 492 aa17■□□□□ 0.31
THBS3-204ENST00000460050 MORF4L1Q9UBU8 362 aa17■□□□□ 0.31
THBS3-204ENST00000460050 TMX2Q9Y320 296 aa17■□□□□ 0.31
THBS3-204ENST00000460050 MYPNQ86TC9 1320 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 KIAA0100Q14667 2235 aaKnown RBP16.99■□□□□ 0.31
THBS3-204ENST00000460050 TNPO2O14787 897 aaKnown RBP16.99■□□□□ 0.31
THBS3-204ENST00000460050 PRDM1O75626 825 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 EEF2P13639 858 aaKnown RBP16.99■□□□□ 0.31
THBS3-204ENST00000460050 ATP2B2Q01814 1243 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 PPARAQ07869 468 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 CATSPERGQ6ZRH7 1159 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 ARMC5Q96C12 935 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.99■□□□□ 0.31
THBS3-204ENST00000460050 ZNF287Q9HBT7 754 aa16.99■□□□□ 0.31
THBS3-204ENST00000460050 CCDC171Q6TFL3 1326 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 PEX10O60683 326 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 SLC3A2P08195 630 aaKnown RBP16.98■□□□□ 0.31
THBS3-204ENST00000460050 PRKCZQ05513 592 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 PDE4BQ07343 736 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 KIAA1755Q5JYT7 1200 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 ZNF444Q8N0Y2 327 aaPredicted RBP16.98■□□□□ 0.31
THBS3-204ENST00000460050 GTF3C2Q8WUA4 911 aaPredicted RBP16.98■□□□□ 0.31
THBS3-204ENST00000460050 PAGR1Q9BTK6 254 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 VCPKMTQ9H867 229 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 TXNRD2Q9NNW7 524 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 DIAPH3Q9NSV4 1193 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 GABRQQ9UN88 632 aa16.98■□□□□ 0.31
THBS3-204ENST00000460050 GSPT1P15170 499 aaKnown RBP16.97■□□□□ 0.31
THBS3-204ENST00000460050 ALX1Q15699 326 aa16.97■□□□□ 0.31
THBS3-204ENST00000460050 TTC22Q5TAA0 569 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms