RNA–Protein interactions for RNA: ENST00000458516.5

TRIM39-211, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-211ENST00000458516 ERO1BQ86YB8 467 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 SLC10A4Q96EP9 437 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 KIF2CQ99661 725 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 ZKSCAN3Q9BRR0 538 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 MTMR4Q9NYA4 1195 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 LOC285556D6RIA3 1793 aa19.85■□□□□ 0.77
TRIM39-211ENST00000458516 WDR19Q8NEZ3 1342 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 PRC1O43663 620 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 HMGB1P09429 215 aaKnown RBP19.84■□□□□ 0.77
TRIM39-211ENST00000458516 MCM5P33992 734 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 GJA5P36382 358 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 EXOSC10Q01780 885 aaKnown RBP19.84■□□□□ 0.77
TRIM39-211ENST00000458516 PPATQ06203 517 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 RGMBQ6NW40 437 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 BLOC1S2Q6QNY1 142 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 DHX32Q7L7V1 743 aaKnown RBP19.84■□□□□ 0.77
TRIM39-211ENST00000458516 IQCA1Q86XH1 822 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 SIAH1Q8IUQ4 282 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 OPTNQ96CV9 577 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 HHIPL1Q96JK4 782 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 ZSCAN10Q96SZ4 725 aaPredicted RBP19.84■□□□□ 0.77
TRIM39-211ENST00000458516 KANSL2Q9H9L4 492 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 ZSWIM6Q9HCJ5 1215 aa19.84■□□□□ 0.77
TRIM39-211ENST00000458516 TNKSO95271 1327 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 RPS6KB1P23443 525 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 C1QTNF8P60827 252 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 SEC23AQ15436 765 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 RCSD1Q6JBY9 416 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 RASAL3Q86YV0 1011 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 OTUD5Q96G74 571 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 WNK4Q96J92 1243 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 TCEANC2Q96MN5 208 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 UBAC1Q9BSL1 405 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 WDR18Q9BV38 432 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 TBC1D2Q9BYX2 928 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 AS3MTQ9HBK9 375 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 NYAP2Q9P242 653 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 AFG3L2Q9Y4W6 797 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 ZHX2Q9Y6X8 837 aa19.83■□□□□ 0.77
TRIM39-211ENST00000458516 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 EEF2P13639 858 aaKnown RBP19.82■□□□□ 0.76
TRIM39-211ENST00000458516 ZNF157P51786 506 aaPredicted RBP19.82■□□□□ 0.76
TRIM39-211ENST00000458516 PPIL2Q13356 520 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 RUFY3Q7L099 469 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 ENAHQ8N8S7 591 aaPredicted RBP19.82■□□□□ 0.76
TRIM39-211ENST00000458516 ACER1Q8TDN7 264 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 MTA3Q9BTC8 594 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 LRRC2Q9BYS8 371 aa19.82■□□□□ 0.76
TRIM39-211ENST00000458516 UPF3BQ9BZI7 483 aaKnown RBP19.82■□□□□ 0.76
TRIM39-211ENST00000458516 RASSF10A6NK89 507 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 IFIT3O14879 490 aaKnown RBP19.81■□□□□ 0.76
TRIM39-211ENST00000458516 TTLL1O95922 423 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 SLC10A3P09131 477 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 ECE1P42892 770 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 CCDC178Q5BJE1 867 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 DGKHQ86XP1 1220 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 ZNF280CQ8ND82 737 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 IGDCC4Q8TDY8 1250 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 TMEM87BQ96K49 555 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 ARHGEF10LQ9HCE6 1279 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 GPHNQ9NQX3 736 aaPredicted RBP19.81■□□□□ 0.76
TRIM39-211ENST00000458516 KCNH4Q9UQ05 1017 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 CYP46A1Q9Y6A2 500 aa19.81■□□□□ 0.76
TRIM39-211ENST00000458516 SH2B2O14492 632 aaPredicted RBP19.8■□□□□ 0.76
TRIM39-211ENST00000458516 IRF6O14896 467 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 ATP2B2Q01814 1243 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 SPP2Q13103 211 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 TMEM67Q5HYA8 995 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 PPP4R3BQ5MIZ7 849 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 SPRYD7Q5W111 196 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 ANKS1AQ92625 1134 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 MKL1Q969V6 931 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 SENP2Q9HC62 589 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 CLIP2Q9UDT6 1046 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 STX8Q9UNK0 236 aa19.8■□□□□ 0.76
TRIM39-211ENST00000458516 TRIM75PA6NK02 468 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 FAM155AB1AL88 458 aaPredicted RBP19.79■□□□□ 0.76
TRIM39-211ENST00000458516 ZBTB48P10074 688 aaPredicted RBP19.79■□□□□ 0.76
TRIM39-211ENST00000458516 HTRA3P83110 453 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 MTMR2Q13614 643 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 SART3Q15020 963 aaKnown RBP19.79■□□□□ 0.76
TRIM39-211ENST00000458516 IFFO2Q5TF58 517 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 LRRC47Q8N1G4 583 aaKnown RBP19.79■□□□□ 0.76
TRIM39-211ENST00000458516 TTC14Q96N46 770 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 TMEM47Q9BQJ4 181 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 LY9Q9HBG7 655 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 TMX2Q9Y320 296 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 PARP14Q460N5 1801 aa19.79■□□□□ 0.76
TRIM39-211ENST00000458516 THSD7BQ9C0I4 1608 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 ERICH2A1L162 156 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 USP17L10C9JJH3 530 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 TOP1P11387 765 aaKnown RBP19.78■□□□□ 0.76
TRIM39-211ENST00000458516 HSPA6P17066 643 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 MKRN3Q13064 507 aaKnown RBP19.78■□□□□ 0.76
TRIM39-211ENST00000458516 WTAPQ15007 396 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 DEFB115Q30KQ5 88 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 IFIT1BQ5T764 474 aaKnown RBP19.78■□□□□ 0.76
TRIM39-211ENST00000458516 CYP4F22Q6NT55 531 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 FEZ1Q99689 392 aa19.78■□□□□ 0.76
TRIM39-211ENST00000458516 AGXT2Q9BYV1 514 aa19.78■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms