RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 NAA16Q6N069 864 aaPredicted RBP17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 FOXP4Q8IVH2 680 aaPredicted RBP17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 CRACR2BQ8N4Y2 399 aaPredicted RBP17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 TXNRD2Q9NNW7 524 aa17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 GINM1Q9NU53 330 aa17.62■□□□□ 0.41
UPF3AP2-201ENST00000457924 MAST2Q6P0Q8 1798 aa17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 CDK5RAP2Q96SN8 1893 aa17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 MAPKAPK5Q8IW41 473 aa17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 GTF3C2Q8WUA4 911 aaPredicted RBP17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 TGFBRAP1Q8WUH2 860 aa17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 FOCADQ5VW36 1801 aa17.61■□□□□ 0.41
UPF3AP2-201ENST00000457924 PEX10O60683 326 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 GNAI2P04899 355 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 RGS2P41220 211 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 RARSP54136 660 aaKnown RBP17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 ERVK-9P63128 1117 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 ERVK-24P63145 666 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 CACNB2Q08289 660 aaPredicted RBP17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 Q7L0L9 218 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 RBPJLQ9UBG7 517 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 PFASO15067 1338 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 FLT1P17948 1338 aa17.6■□□□□ 0.41
UPF3AP2-201ENST00000457924 GDF11O95390 407 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 PPP4CP60510 307 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 JAG1P78504 1218 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 Q3C1V9 767 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 TTC39AQ5SRH9 613 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 GPR142Q7Z601 462 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 DNAJC18Q9H819 358 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 CWC22Q9HCG8 908 aaKnown RBP17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 SNRKQ9NRH2 765 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 PALD1Q9ULE6 856 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 ZBTB21Q9ULJ3 1066 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 STXBP5LQ9Y2K9 1186 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 COL6A3P12111 3177 aa17.59■□□□□ 0.41
UPF3AP2-201ENST00000457924 HLA-DOAP06340 250 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 COL6A1P12109 1028 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 CCND3P30281 292 aaPredicted RBP17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 CCDC158Q5M9N0 1113 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L2Q6R6M4 530 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 ATF7IPQ6VMQ6 1270 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 PLEKHH3Q7Z736 793 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 METTL16Q86W50 562 aaKnown RBP17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP6NLQ92738 828 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 APBA2Q99767 749 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 PAGR1Q9BTK6 254 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 PORCNQ9H237 461 aa17.58■□□□□ 0.4
UPF3AP2-201ENST00000457924 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
UPF3AP2-201ENST00000457924 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
UPF3AP2-201ENST00000457924 SHROOM1Q2M3G4 852 aaPredicted RBP17.57■□□□□ 0.4
UPF3AP2-201ENST00000457924 MORN1Q5T089 497 aa17.57■□□□□ 0.4
UPF3AP2-201ENST00000457924 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
UPF3AP2-201ENST00000457924 IGSF3O75054 1194 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 GLRX3O76003 335 aaKnown RBP17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 CCL14Q16627 93 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 LHX8Q68G74 356 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 ADGRA1Q86SQ6 560 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 GPR108Q9NPR9 543 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 EMILIN3Q9NT22 766 aa17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 SAP30BPQ9UHR5 308 aaKnown RBP17.56■□□□□ 0.4
UPF3AP2-201ENST00000457924 MYO5AQ9Y4I1 1855 aaKnown RBP17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 CYP2E1P05181 493 aaPredicted RBP17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 CCNA1P78396 465 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 PLCB2Q00722 1185 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 LRRC26Q2I0M4 334 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 TNNI3KQ59H18 835 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 DBNDD2Q9BQY9 259 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 BOLA1Q9Y3E2 137 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 RABGAP1Q9Y3P9 1069 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 FPGT-TNNI3KV9GXZ4 949 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 FRMPD3Q5JV73 1810 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 MYH1P12882 1939 aa17.55■□□□□ 0.4
UPF3AP2-201ENST00000457924 TRIM27P14373 513 aa17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 MDM2Q00987 491 aaPredicted RBP17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 MAP2K5Q13163 448 aa17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 OS9Q13438 667 aaPredicted RBP17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 MFSD14CQ5VZR4 134 aa17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 EDC3Q96F86 508 aaKnown RBP17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 FEZ1Q99689 392 aa17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 TMEM121BQ9BXQ6 578 aaPredicted RBP17.54■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L15C9J2P7 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L13C9JLJ4 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L11C9JVI0 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L18D6R9N7 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L22D6RA61 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L17D6RBQ6 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L19D6RCP7 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L20D6RJB6 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 GH2P01242 217 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP14P54578 494 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 USP17L24Q0WX57 530 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 ZYXQ15942 572 aaKnown RBP17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 WDR78Q5VTH9 848 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 POTEEQ6S8J3 1075 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 C12orf42Q96LP6 360 aa17.53■□□□□ 0.4
UPF3AP2-201ENST00000457924 CYP7A1P22680 504 aa17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 ZAP70P43403 619 aa17.52■□□□□ 0.4
UPF3AP2-201ENST00000457924 DYNLL1P63167 89 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms