RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TICAM2Q86XR7 235 aa21.59■■□□□ 1.05
PDLIM2-215ENST00000456545 ZNF287Q9HBT7 754 aa21.59■■□□□ 1.05
PDLIM2-215ENST00000456545 SLC3A2P08195 630 aaKnown RBP21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 HOXD10P28358 340 aa21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 PSMC4P43686 418 aa21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 MCMDC2Q4G0Z9 681 aa21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 CCDC129Q6ZRS4 1044 aa21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 ASCC2Q9H1I8 757 aaPredicted RBP21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 HPS5Q9UPZ3 1129 aa21.58■■□□□ 1.05
PDLIM2-215ENST00000456545 MYH8P13535 1937 aa21.58■■□□□ 1.04
PDLIM2-215ENST00000456545 SMIM22K7EJ46 135 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 AKR1B1P15121 316 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 GCLCP48506 637 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 ZNF444Q8N0Y2 327 aaPredicted RBP21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 ACER1Q8TDN7 264 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 KIAA1683Q9H0B3 1180 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 ARHGEF10LQ9HCE6 1279 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 EMILIN3Q9NT22 766 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 PTPN22Q9Y2R2 807 aa21.57■■□□□ 1.04
PDLIM2-215ENST00000456545 GNRH1P01148 92 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 BCRP11274 1271 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 GUCY1A2P33402 732 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 ATP2B2Q01814 1243 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 ANKRD13CQ8N6S4 541 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 FAM227BQ96M60 508 aa21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 EPB41L4AQ9HCS5 686 aaPredicted RBP21.56■■□□□ 1.04
PDLIM2-215ENST00000456545 ADGRA2Q96PE1 1338 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 SDSP20132 328 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 HOXA7P31268 230 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 MFAP1P55081 439 aaKnown RBP21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 FCGRTP55899 365 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 PDE4BQ07343 736 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 NMIQ13287 307 aaPredicted RBP21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 ARHGAP39Q9C0H5 1083 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 SH2D4AQ9H788 454 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 DIAPH3Q9NSV4 1193 aa21.55■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L15C9J2P7 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L13C9JLJ4 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L11C9JVI0 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L18D6R9N7 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L22D6RA61 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L17D6RBQ6 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L19D6RCP7 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L20D6RJB6 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 HIP1O00291 1037 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 ICA1Q05084 483 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 USP17L24Q0WX57 530 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 P2RX7Q99572 595 aaKnown RBP21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 KANSL2Q9H9L4 492 aa21.54■■□□□ 1.04
PDLIM2-215ENST00000456545 LOC285556D6RIA3 1793 aa21.53■■□□□ 1.04
PDLIM2-215ENST00000456545 A0A0D9SFI3 127 aa21.53■■□□□ 1.04
PDLIM2-215ENST00000456545 PRMT2P55345 433 aa21.53■■□□□ 1.04
PDLIM2-215ENST00000456545 C12orf42Q96LP6 360 aa21.53■■□□□ 1.04
PDLIM2-215ENST00000456545 RAD21O60216 631 aa21.52■■□□□ 1.04
PDLIM2-215ENST00000456545 PDE4AP27815 886 aa21.52■■□□□ 1.04
PDLIM2-215ENST00000456545 PPARAQ07869 468 aa21.52■■□□□ 1.04
PDLIM2-215ENST00000456545 CCAR1Q8IX12 1150 aaKnown RBP21.52■■□□□ 1.04
PDLIM2-215ENST00000456545 TRIM47Q96LD4 638 aa21.52■■□□□ 1.04
PDLIM2-215ENST00000456545 TNPO2O14787 897 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 PRDM1O75626 825 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 NEFLP07196 543 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 RASA1P20936 1047 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 HERVK_113P62684 666 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 CAP1Q01518 475 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 FAM110CQ1W6H9 321 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 CWC27Q6UX04 472 aaKnown RBP21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 NBPF11Q86T75 865 aa21.51■■□□□ 1.03
PDLIM2-215ENST00000456545 A0A1W2PRG0 241 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 EEF2P13639 858 aaKnown RBP21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 VCAM1P19320 739 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 TTC22Q5TAA0 569 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 VPS53Q5VIR6 699 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 CATSPERGQ6ZRH7 1159 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 CLEC10AQ8IUN9 316 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 RAET1EQ8TD07 263 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 GTF3C2Q8WUA4 911 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 COA7Q96BR5 231 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 PAGR1Q9BTK6 254 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 RPAP3Q9H6T3 665 aaPredicted RBP21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 SRRDQ9UH36 339 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 PTCH2Q9Y6C5 1203 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 CCDC171Q6TFL3 1326 aa21.5■■□□□ 1.03
PDLIM2-215ENST00000456545 ROBO3Q96MS0 1386 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 TSPY3P0CV98 308 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 TSPY8P0CW00 308 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 SLC9C1Q4G0N8 1177 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 GPRC5AQ8NFJ5 357 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 TANGO6Q9C0B7 1094 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 CWC22Q9HCG8 908 aaKnown RBP21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 GOPCQ9HD26 462 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 TMX2Q9Y320 296 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 MYPNQ86TC9 1320 aa21.49■■□□□ 1.03
PDLIM2-215ENST00000456545 HSPD1P10809 573 aaKnown RBP21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 CTGFP29279 349 aa21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 CTDSPL2Q05D32 466 aa21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 ALX1Q15699 326 aa21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 LPAR1Q92633 364 aa21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 TOMM22Q9NS69 142 aa21.48■■□□□ 1.03
PDLIM2-215ENST00000456545 FGAP02671 866 aa21.47■■□□□ 1.03
PDLIM2-215ENST00000456545 SAMD1Q6SPF0 538 aaPredicted RBP21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms