RNA–Protein interactions for RNA: ENST00000454913.5

NELFE-207, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 914 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-207ENST00000454913 HOXC6P09630 235 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 UBTFL1P0CB47 393 aaPredicted RBP19.24■□□□□ 0.67
NELFE-207ENST00000454913 GRB14Q14449 540 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 MVPQ14764 893 aaKnown RBP19.24■□□□□ 0.67
NELFE-207ENST00000454913 SNX17Q15036 470 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 TBC1D9Q6ZT07 1266 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 DPP9Q86TI2 863 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 UHRF1Q96T88 793 aaPredicted RBP19.24■□□□□ 0.67
NELFE-207ENST00000454913 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
NELFE-207ENST00000454913 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.23■□□□□ 0.67
NELFE-207ENST00000454913 A0A1B0GUL7 405 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L19D6RCP7 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L20D6RJB6 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 RAG1P15918 1043 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 EPHB4P54760 987 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 TLE2Q04725 743 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 USP17L24Q0WX57 530 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 ASB2Q96Q27 587 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 DNAJC18Q9H819 358 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 GINM1Q9NU53 330 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 TACC3Q9Y6A5 838 aa19.23■□□□□ 0.67
NELFE-207ENST00000454913 CLTBP09497 229 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 ITGB8P26012 769 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 PI16Q6UXB8 463 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 FOXP4Q8IVH2 680 aaPredicted RBP19.22■□□□□ 0.67
NELFE-207ENST00000454913 MAPKAPK5Q8IW41 473 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 TIFAQ96CG3 184 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 HMG20BQ9P0W2 317 aa19.22■□□□□ 0.67
NELFE-207ENST00000454913 FOCADQ5VW36 1801 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 SEPT4O43236 478 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 FPGSQ05932 587 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 SPATA5Q8NB90 893 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 TGFBRAP1Q8WUH2 860 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 NEUROD6Q96NK8 337 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 AATFQ9NY61 560 aaKnown RBP eCLIP19.21■□□□□ 0.67
NELFE-207ENST00000454913 BTBD7Q9P203 1132 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 LRP2BPQ9P2M1 347 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 AKAP2Q9Y2D5 859 aa19.21■□□□□ 0.67
NELFE-207ENST00000454913 BAG3O95817 575 aa19.2■□□□□ 0.66
NELFE-207ENST00000454913 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
NELFE-207ENST00000454913 MRPS5P82675 430 aaKnown RBP19.2■□□□□ 0.66
NELFE-207ENST00000454913 LRRC41Q15345 812 aa19.2■□□□□ 0.66
NELFE-207ENST00000454913 PALD1Q9ULE6 856 aa19.2■□□□□ 0.66
NELFE-207ENST00000454913 PLXNA1Q9UIW2 1896 aa19.2■□□□□ 0.66
NELFE-207ENST00000454913 ZNF236Q9UL36 1845 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 NCOR1O75376 2440 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 PQBP1O60828 265 aaKnown RBP19.19■□□□□ 0.66
NELFE-207ENST00000454913 GH2P01242 217 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 HLA-DOAP06340 250 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 ADORA2AP29274 412 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 C1orf53Q5VUE5 145 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 OLFML2BQ68BL8 750 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 CATSPERGQ6ZRH7 1159 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 CCDC129Q6ZRS4 1044 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 PRDM12Q9H4Q4 367 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 SAP30BPQ9UHR5 308 aaKnown RBP19.19■□□□□ 0.66
NELFE-207ENST00000454913 FLT1P17948 1338 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 MYO9BQ13459 2157 aa19.19■□□□□ 0.66
NELFE-207ENST00000454913 BDP1A6H8Y1 2624 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 PLCG2P16885 1265 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 VCAM1P19320 739 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 TFCP2Q12800 502 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 CCDC85BQ15834 202 aaPredicted RBP19.18■□□□□ 0.66
NELFE-207ENST00000454913 FAM47AQ5JRC9 791 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 ATF7IPQ6VMQ6 1270 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 C12orf42Q96LP6 360 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 MRS2Q9HD23 443 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 TMEM39AQ9NV64 488 aa19.18■□□□□ 0.66
NELFE-207ENST00000454913 USP14P54578 494 aa19.17■□□□□ 0.66
NELFE-207ENST00000454913 RAB3GAP1Q15042 981 aa19.17■□□□□ 0.66
NELFE-207ENST00000454913 PRAMEF19Q5SWL8 479 aa19.17■□□□□ 0.66
NELFE-207ENST00000454913 AKNAD1Q5T1N1 836 aa19.17■□□□□ 0.66
NELFE-207ENST00000454913 METTL16Q86W50 562 aaKnown RBP19.17■□□□□ 0.66
NELFE-207ENST00000454913 COPRSQ9NQ92 184 aa19.17■□□□□ 0.66
NELFE-207ENST00000454913 TCF20Q9UGU0 1960 aaKnown RBP19.17■□□□□ 0.66
NELFE-207ENST00000454913 SPDYE16A6NNV3 312 aaPredicted RBP19.16■□□□□ 0.66
NELFE-207ENST00000454913 KIAA0355O15063 1070 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 IGFBP4P22692 258 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 NAA16Q6N069 864 aaPredicted RBP19.16■□□□□ 0.66
NELFE-207ENST00000454913 LBX2Q6XYB7 198 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 C1QTNF1Q9BXJ1 281 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 XPNPEP3Q9NQH7 507 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 SLC5A4Q9NY91 659 aa19.16■□□□□ 0.66
NELFE-207ENST00000454913 MYH1P12882 1939 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 STRNO43815 780 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 IGHA2P01877 340 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 SSH1Q8WYL5 1049 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 RPAP3Q9H6T3 665 aaPredicted RBP19.15■□□□□ 0.66
NELFE-207ENST00000454913 PHF24Q9UPV7 400 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 HDAC5Q9UQL6 1122 aa19.15■□□□□ 0.66
NELFE-207ENST00000454913 SMCHD1A6NHR9 2005 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms