RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 FAM227BQ96M60 508 aa29.78■■■□□ 2.36
MSH2-203ENST00000454849 FMNL1O95466 1100 aaPredicted RBP29.77■■■□□ 2.36
MSH2-203ENST00000454849 GNAT2P19087 354 aa29.77■■■□□ 2.36
MSH2-203ENST00000454849 OSBPP22059 807 aa29.77■■■□□ 2.36
MSH2-203ENST00000454849 USP17L2Q6R6M4 530 aa29.77■■■□□ 2.36
MSH2-203ENST00000454849 ARPP21Q9UBL0 812 aaPredicted RBP29.77■■■□□ 2.36
MSH2-203ENST00000454849 PNMA3Q9UL41 463 aa29.77■■■□□ 2.36
MSH2-203ENST00000454849 PDE4AP27815 886 aa29.76■■■□□ 2.35
MSH2-203ENST00000454849 SOX10P56693 466 aa29.76■■■□□ 2.35
MSH2-203ENST00000454849 IFNL3Q8IZI9 196 aa29.76■■■□□ 2.35
MSH2-203ENST00000454849 P2RX7Q99572 595 aaKnown RBP29.76■■■□□ 2.35
MSH2-203ENST00000454849 LOC285556D6RIA3 1793 aa29.75■■■□□ 2.35
MSH2-203ENST00000454849 A0A1W2PRG0 241 aa29.75■■■□□ 2.35
MSH2-203ENST00000454849 IRX3P78415 501 aaPredicted RBP29.75■■■□□ 2.35
MSH2-203ENST00000454849 PABPC4Q13310 644 aaKnown RBP eCLIP29.75■■■□□ 2.35
MSH2-203ENST00000454849 SBK1Q52WX2 424 aa29.75■■■□□ 2.35
MSH2-203ENST00000454849 GIMAP6Q6P9H5 292 aa29.75■■■□□ 2.35
MSH2-203ENST00000454849 PTCH2Q9Y6C5 1203 aa29.75■■■□□ 2.35
MSH2-203ENST00000454849 A0A0D9SFI3 127 aa29.74■■■□□ 2.35
MSH2-203ENST00000454849 ARHGEF6Q15052 776 aa29.74■■■□□ 2.35
MSH2-203ENST00000454849 NMIQ13287 307 aaPredicted RBP29.73■■■□□ 2.35
MSH2-203ENST00000454849 VPS53Q5VIR6 699 aa29.73■■■□□ 2.35
MSH2-203ENST00000454849 TMEM179Q6ZVK1 233 aa29.73■■■□□ 2.35
MSH2-203ENST00000454849 FOXP2O15409 715 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 PRDM1O75626 825 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 ATP2B2Q01814 1243 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 SIAH1Q8IUQ4 282 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 NACAP1Q9BZK3 213 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 KIAA1683Q9H0B3 1180 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 OSBPL3Q9H4L5 887 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 MKNK2Q9HBH9 465 aa29.72■■■□□ 2.35
MSH2-203ENST00000454849 HOXA7P31268 230 aaPredicted RBP29.71■■■□□ 2.35
MSH2-203ENST00000454849 NAPBQ9H115 298 aa29.71■■■□□ 2.35
MSH2-203ENST00000454849 MYCP01106 439 aaPredicted RBP29.7■■■□□ 2.35
MSH2-203ENST00000454849 KIAA1755Q5JYT7 1200 aa29.7■■■□□ 2.35
MSH2-203ENST00000454849 CCDC17Q96LX7 622 aa29.7■■■□□ 2.35
MSH2-203ENST00000454849 VCAM1P19320 739 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 RASA1P20936 1047 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 USP14P54578 494 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 FCGRTP55899 365 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 ICA1Q05084 483 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 HELLSQ9NRZ9 838 aa29.69■■■□□ 2.34
MSH2-203ENST00000454849 SDSP20132 328 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 HERVK_113P62684 666 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 MCMDC2Q4G0Z9 681 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 ZNF589Q86UQ0 364 aaPredicted RBP29.68■■■□□ 2.34
MSH2-203ENST00000454849 C12orf42Q96LP6 360 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 GNL3Q9BVP2 549 aaKnown RBP eCLIP29.68■■■□□ 2.34
MSH2-203ENST00000454849 RPAP3Q9H6T3 665 aaPredicted RBP29.68■■■□□ 2.34
MSH2-203ENST00000454849 TXNRD2Q9NNW7 524 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 INCENPQ9NQS7 918 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 SRRDQ9UH36 339 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 GABRQQ9UN88 632 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 HTTP42858 3142 aa29.68■■■□□ 2.34
MSH2-203ENST00000454849 MYH8P13535 1937 aa29.67■■■□□ 2.34
MSH2-203ENST00000454849 EEF2P13639 858 aaKnown RBP29.67■■■□□ 2.34
MSH2-203ENST00000454849 GCLCP48506 637 aaPredicted RBP29.67■■■□□ 2.34
MSH2-203ENST00000454849 POTEEQ6S8J3 1075 aa29.67■■■□□ 2.34
MSH2-203ENST00000454849 SPICE1Q8N0Z3 855 aa29.67■■■□□ 2.34
MSH2-203ENST00000454849 SH3TC2Q8TF17 1288 aa29.67■■■□□ 2.34
MSH2-203ENST00000454849 PAGR1Q9BTK6 254 aa29.67■■■□□ 2.34
MSH2-203ENST00000454849 USP17L15C9J2P7 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L13C9JLJ4 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L11C9JVI0 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L18D6R9N7 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L22D6RA61 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L17D6RBQ6 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L19D6RCP7 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L20D6RJB6 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 PRKCZQ05513 592 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 CTDSPL2Q05D32 466 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 USP17L24Q0WX57 530 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 FAM110CQ1W6H9 321 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 ARHGEF10LQ9HCE6 1279 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 TAOK2Q9UL54 1235 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 MYPNQ86TC9 1320 aa29.66■■■□□ 2.34
MSH2-203ENST00000454849 TNPO2O14787 897 aaKnown RBP29.65■■■□□ 2.34
MSH2-203ENST00000454849 RAD21O60216 631 aa29.65■■■□□ 2.34
MSH2-203ENST00000454849 PPARAQ07869 468 aa29.65■■■□□ 2.34
MSH2-203ENST00000454849 SLC9C1Q4G0N8 1177 aa29.65■■■□□ 2.34
MSH2-203ENST00000454849 CATSPERGQ6ZRH7 1159 aa29.65■■■□□ 2.34
MSH2-203ENST00000454849 RBPJLQ9UBG7 517 aa29.65■■■□□ 2.34
MSH2-203ENST00000454849 ROBO3Q96MS0 1386 aa29.64■■■□□ 2.34
MSH2-203ENST00000454849 HOXD10P28358 340 aa29.64■■■□□ 2.34
MSH2-203ENST00000454849 SAMD1Q6SPF0 538 aaPredicted RBP29.64■■■□□ 2.34
MSH2-203ENST00000454849 RAET1EQ8TD07 263 aa29.64■■■□□ 2.34
MSH2-203ENST00000454849 GNRH1P01148 92 aa29.63■■■□□ 2.33
MSH2-203ENST00000454849 Q3C1V9 767 aa29.63■■■□□ 2.33
MSH2-203ENST00000454849 FAM47AQ5JRC9 791 aa29.63■■■□□ 2.33
MSH2-203ENST00000454849 CWC27Q6UX04 472 aaKnown RBP29.63■■■□□ 2.33
MSH2-203ENST00000454849 ZNF444Q8N0Y2 327 aaPredicted RBP29.63■■■□□ 2.33
MSH2-203ENST00000454849 KANSL2Q9H9L4 492 aa29.63■■■□□ 2.33
MSH2-203ENST00000454849 TANGO6Q9C0B7 1094 aa29.62■■■□□ 2.33
MSH2-203ENST00000454849 DIAPH3Q9NSV4 1193 aa29.62■■■□□ 2.33
MSH2-203ENST00000454849 TMX2Q9Y320 296 aa29.62■■■□□ 2.33
MSH2-203ENST00000454849 TACC3Q9Y6A5 838 aa29.62■■■□□ 2.33
MSH2-203ENST00000454849 GSPT1P15170 499 aaKnown RBP29.61■■■□□ 2.33
MSH2-203ENST00000454849 GPRC5AQ8NFJ5 357 aa29.61■■■□□ 2.33
MSH2-203ENST00000454849 HSPD1P10809 573 aaKnown RBP29.6■■■□□ 2.33
MSH2-203ENST00000454849 FLT3LGP49771 235 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms