RNA–Protein interactions for RNA: ENST00000454824.5

NCL-206, Transcript of nucleolin, humanhuman

TSL 3

Gene NCL, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-206ENST00000454824 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
NCL-206ENST00000454824 RAD21O60216 631 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 HSPA8P11142 646 aaKnown RBP8.2□□□□□ -1.1
NCL-206ENST00000454824 CDK8P49336 464 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 PDE4BQ07343 736 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 PABPC4Q13310 644 aaKnown RBP eCLIP8.2□□□□□ -1.1
NCL-206ENST00000454824 TATDN1Q6P1N9 297 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 CASC1Q6TDU7 716 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 CCDC84Q86UT8 332 aaPredicted RBP8.2□□□□□ -1.1
NCL-206ENST00000454824 METTL16Q86W50 562 aaKnown RBP8.2□□□□□ -1.1
NCL-206ENST00000454824 BRI3BPQ8WY22 251 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 MS4A4AQ96JQ5 239 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 CCDC17Q96LX7 622 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.2□□□□□ -1.1
NCL-206ENST00000454824 ZBTB21Q9ULJ3 1066 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 AFG3L2Q9Y4W6 797 aa8.2□□□□□ -1.1
NCL-206ENST00000454824 FOCADQ5VW36 1801 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 TESPA1A2RU30 521 aaPredicted RBP8.19□□□□□ -1.1
NCL-206ENST00000454824 C19orf81C9J6K1 198 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 BTBD19C9JJ37 291 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 USP17L10C9JJH3 530 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 PDHXO00330 501 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 IGF2BP3O00425 579 aaKnown RBP eCLIP8.19□□□□□ -1.1
NCL-206ENST00000454824 OSBPP22059 807 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 SHMT1P34896 483 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 HMGCS2P54868 508 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 RRP1BQ14684 758 aaKnown RBP8.19□□□□□ -1.1
NCL-206ENST00000454824 ARHGEF6Q15052 776 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 ZYXQ15942 572 aaKnown RBP8.19□□□□□ -1.1
NCL-206ENST00000454824 SBK1Q52WX2 424 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 KIAA1211Q6ZU35 1233 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 SLC44A5Q8NCS7 719 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 PTPN18Q99952 460 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 DNAJC18Q9H819 358 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 ARHGEF10LQ9HCE6 1279 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 PRDM10Q9NQV6 1147 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 KCNH4Q9UQ05 1017 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 CCDC171Q6TFL3 1326 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 NAV1Q8NEY1 1877 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 OTOFQ9HC10 1997 aa8.19□□□□□ -1.1
NCL-206ENST00000454824 A0A0G2JLL6 359 aaPredicted RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 ZNF213O14771 459 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 FKTNO75072 461 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 TSPY3P0CV98 308 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 TSPY8P0CW00 308 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 HSPD1P10809 573 aaKnown RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 GSPT1P15170 499 aaKnown RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 TIE1P35590 1138 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 USP14P54578 494 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 BACE1P56817 501 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 IRX3P78415 501 aaPredicted RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 CTDSPL2Q05D32 466 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 PPARAQ07869 468 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 MTMR2Q13614 643 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 KIF22Q14807 665 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 SEPT2Q15019 361 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 RRP12Q5JTH9 1297 aaKnown RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 TMEM179Q6ZVK1 233 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 FAM43AQ8N2R8 423 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 CTNNA3Q9UI47 895 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 ISY1Q9ULR0 285 aaKnown RBP8.18□□□□□ -1.1
NCL-206ENST00000454824 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
NCL-206ENST00000454824 DOCK1Q14185 1865 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 TSPY2A6NKD2 308 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 TTLL13PA6NNM8 815 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 GPR25O00155 361 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 RANBP6O60518 1105 aaKnown RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 PRDM1O75626 825 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 FGAP02671 866 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 AKR1B1P15121 316 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 CHMLP26374 656 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 HAND2P61296 217 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 JAG1P78504 1218 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 ICA1Q05084 483 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 GABPAQ06546 454 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 CRHR2Q13324 411 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 ALX1Q15699 326 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 SHROOM1Q2M3G4 852 aaPredicted RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 ZNF589Q86UQ0 364 aaPredicted RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 CCAR1Q8IX12 1150 aaKnown RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 PROCA1Q8NCQ7 364 aaPredicted RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 PARK7Q99497 189 aaKnown RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 KANSL2Q9H9L4 492 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 EPB41L4AQ9HCS5 686 aaPredicted RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 BMP2KQ9NSY1 1161 aaPredicted RBP8.17□□□□□ -1.1
NCL-206ENST00000454824 MYH8P13535 1937 aa8.17□□□□□ -1.1
NCL-206ENST00000454824 SMIM22K7EJ46 135 aa8.16□□□□□ -1.1
NCL-206ENST00000454824 TFAP4Q01664 338 aa8.16□□□□□ -1.1
NCL-206ENST00000454824 SP3Q02447 781 aa8.16□□□□□ -1.1
NCL-206ENST00000454824 IMMTQ16891 758 aaKnown RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms