RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 RABGAP1Q9Y3P9 1069 aa5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.45□□□□□ -1.54
HMGB3P21-201ENST00000452483 BICDL2A1A5D9 508 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 C9orf172C9J069 976 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 EREGO14944 169 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 HIP1RO75146 1068 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 KATNA1O75449 491 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 USP17L7P0C7H9 530 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 GATA4P43694 442 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 GEMIN4P57678 1058 aaKnown RBP5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 PICALMQ13492 652 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 COL9A2Q14055 689 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 MBTPS1Q14703 1052 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 GFOD2Q3B7J2 385 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 TM4SF20Q53R12 229 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM83BQ5T0W9 1011 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 ERAP2Q6P179 960 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZNF354CQ86Y25 554 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 NIM1KQ8IY84 436 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 STK11IPQ8N1F8 1099 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 TTC30BQ8N4P2 665 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 UBR7Q8N806 425 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 ENAHQ8N8S7 591 aaPredicted RBP5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 FBXO41Q8TF61 875 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 PMEPA1Q969W9 287 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 SELENOOQ9BVL4 669 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 LUZP4Q9P127 313 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM8A1Q9UBU6 413 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 POLG2Q9UHN1 485 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 USP21Q9UK80 565 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 HDAC9Q9UKV0 1011 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 MAPK8IP1Q9UQF2 711 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 NUB1Q9Y5A7 615 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 PTCH2Q9Y6C5 1203 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 KDM2BQ8NHM5 1336 aa5.44□□□□□ -1.54
HMGB3P21-201ENST00000452483 KAT6BQ8WYB5 2073 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 F2P00734 622 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 CT47B1P0C2W7 299 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 PTPRAP18433 802 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 EPHA1P21709 976 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 NRG1Q02297 640 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM160A1Q05DH4 1040 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 APOBRQ0VD83 1088 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 PIN1Q13526 163 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 ADGRE1Q14246 886 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 SETDB1Q15047 1291 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 CCDC93Q567U6 631 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 IL31Q6EBC2 164 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 ADAMTSL4Q6UY14 1074 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 ARMCX6Q7L4S7 300 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 DGKHQ86XP1 1220 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 MAP4K3Q8IVH8 894 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 LENG1Q96BZ8 264 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 EAF1Q96JC9 268 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 SCLT1Q96NL6 688 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 ASPSCR1Q9BZE9 553 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 OSBPL7Q9BZF2 842 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 LRRC27Q9C0I9 530 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 MUC3BQ9H195 1237 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 DNAJC25Q9H1X3 360 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 DZANK1Q9NVP4 752 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 USP25Q9UHP3 1055 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 PFDN2Q9UHV9 154 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 PUF60Q9UHX1 559 aaKnown RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 EVLQ9UI08 416 aaPredicted RBP5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 ASAP1Q9ULH1 1129 aa5.43□□□□□ -1.54
HMGB3P21-201ENST00000452483 TMEM238LA0A1B0GVL6 79 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 RASSF10A6NK89 507 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM177BA6PVY3 158 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 MINDY4BA8MYZ0 360 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 DLL1O00548 723 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 IRS4O14654 1257 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 EDN3P14138 238 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 RRM1P23921 792 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 NEK3P51956 506 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 PURAQ00577 322 aaKnown RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 PWP1Q13610 501 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 CCDC96Q2M329 555 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 FAM102BQ5T8I3 360 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 USPL1Q5W0Q7 1092 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 TXNDC11Q6PKC3 985 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 RELL1Q8IUW5 271 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 TCEAL8Q8IYN2 117 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 PPHLN1Q8NEY8 458 aaKnown RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 VPS37AQ8NEZ2 397 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 DCAF11Q8TEB1 546 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 ERP27Q96DN0 273 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 MTMR8Q96EF0 704 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 GPR101Q96P66 508 aaPredicted RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 HHIPQ96QV1 700 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 ZKSCAN3Q9BRR0 538 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 CDH19Q9H159 772 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 NGRNQ9NPE2 291 aaKnown RBP5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 ACTR10Q9NZ32 417 aa5.42□□□□□ -1.54
HMGB3P21-201ENST00000452483 E2F8A0AVK6 867 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 PRRT4C9JH25 899 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 F6X3S4 739 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 LINC01387J3KSC0 135 aa5.41□□□□□ -1.54
HMGB3P21-201ENST00000452483 NFKBIEO00221 500 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms