RNA–Protein interactions for RNA: ENST00000451744.1

LINC00458-203, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best)

Gene LINC00458, Length 1,020 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-203ENST00000451744 YBX3P16989 372 aaKnown RBP eCLIP8.47□□□□□ -1.05
LINC00458-203ENST00000451744 TMPRSS13Q9BYE2 586 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 SLC12A5Q9H2X9 1139 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 ATG3Q9NT62 314 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 ADGRE2Q9UHX3 823 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 EP400Q96L91 3159 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 A0A1W2PP64 1363 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 KIAA0232Q92628 1395 aa8.47□□□□□ -1.05
LINC00458-203ENST00000451744 RGPD2P0DJD1 1756 aa8.46□□□□□ -1.05
LINC00458-203ENST00000451744 NFAT5O94916 1531 aa8.46□□□□□ -1.05
LINC00458-203ENST00000451744 WNK3Q9BYP7 1800 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 LOC100289279A0A1B0GTE1 492 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 FAM83GA6ND36 823 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 DLGAP3O95886 979 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 F13BP05160 661 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 CHRNA2Q15822 529 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 GIMAP7Q8NHV1 300 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 POLIQ9UNA4 740 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 LEMD3Q9Y2U8 911 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 USP19O94966 1318 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 CAMTA1Q9Y6Y1 1673 aa8.46□□□□□ -1.06
LINC00458-203ENST00000451744 TIAF1O95411 115 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 ZC3H6P61129 1189 aaKnown RBP8.45□□□□□ -1.06
LINC00458-203ENST00000451744 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 ABI1Q8IZP0 508 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 SMG8Q8ND04 991 aaKnown RBP8.45□□□□□ -1.06
LINC00458-203ENST00000451744 TMC1Q8TDI8 760 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 GTF3C2Q8WUA4 911 aaPredicted RBP8.45□□□□□ -1.06
LINC00458-203ENST00000451744 CYP4F12Q9HCS2 524 aa8.45□□□□□ -1.06
LINC00458-203ENST00000451744 KTN1Q86UP2 1357 aaKnown RBP8.45□□□□□ -1.06
LINC00458-203ENST00000451744 PHACTR2O75167 634 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 TNFRSF21O75509 655 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 HSPA5P11021 654 aaKnown RBP8.44□□□□□ -1.06
LINC00458-203ENST00000451744 EDN3P14138 238 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 DRD2P14416 443 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 ZNF772Q68DY9 489 aaPredicted RBP8.44□□□□□ -1.06
LINC00458-203ENST00000451744 NME9Q86XW9 330 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.44□□□□□ -1.06
LINC00458-203ENST00000451744 SHISA5Q8N114 240 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 ZNF428Q96B54 188 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 OSBPL1AQ9BXW6 950 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 SUGCTQ9HAC7 445 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 TTC21BQ7Z4L5 1316 aa8.44□□□□□ -1.06
LINC00458-203ENST00000451744 FAM95CA0A1B0GW59 222 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 ERCC3P19447 782 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 NFKBIBQ15653 356 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 MSMPQ1L6U9 139 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 FBLIM1Q8WUP2 373 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 LATS2Q9NRM7 1088 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 FOXD3Q9UJU5 478 aaPredicted RBP8.43□□□□□ -1.06
LINC00458-203ENST00000451744 ANGEL1Q9UNK9 670 aaKnown RBP8.43□□□□□ -1.06
LINC00458-203ENST00000451744 THSD7AQ9UPZ6 1657 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 PEAK1Q9H792 1746 aa8.43□□□□□ -1.06
LINC00458-203ENST00000451744 ESRRAP11474 423 aaPredicted RBP8.42□□□□□ -1.06
LINC00458-203ENST00000451744 FOSL1P15407 271 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 FBLN1P23142 703 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 USP11P51784 963 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 AAMPQ13685 434 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 CDPF1Q6NVV7 123 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 PAOXQ6QHF9 649 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 SNX29Q8TEQ0 813 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 BHLHE41Q9C0J9 482 aaPredicted RBP8.42□□□□□ -1.06
LINC00458-203ENST00000451744 SOX17Q9H6I2 414 aaPredicted RBP8.42□□□□□ -1.06
LINC00458-203ENST00000451744 BTG4Q9NY30 223 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 OVOS2A0A0J9YW53 1432 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 OVOS2Q6IE36 1432 aa8.42□□□□□ -1.06
LINC00458-203ENST00000451744 ANKRD26Q9UPS8 1709 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 CDK12Q9NYV4 1490 aaPredicted RBP8.41□□□□□ -1.06
LINC00458-203ENST00000451744 SSFA2P28290 1259 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 GSTM4Q03013 218 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 ALKBH2Q6NS38 261 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 PHLDB3Q6NSJ2 640 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 UNC5CLQ8IV45 518 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 POLR3GLQ9BT43 218 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 PRDM11Q9NQV5 511 aa8.41□□□□□ -1.06
LINC00458-203ENST00000451744 TRPC5Q9UL62 973 aaPredicted RBP8.41□□□□□ -1.06
LINC00458-203ENST00000451744 MAP2P11137 1827 aaKnown RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 COL5A2P05997 1499 aaPredicted RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 EDC4Q6P2E9 1401 aaKnown RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 METTL12A8MUP2 240 aa8.4□□□□□ -1.06
LINC00458-203ENST00000451744 GCP02774 474 aa8.4□□□□□ -1.06
LINC00458-203ENST00000451744 RBM6P78332 1123 aaKnown RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 CPSF6Q16630 551 aaKnown RBP eCLIP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 EXOSC6Q5RKV6 272 aaKnown RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 PEAR1Q5VY43 1037 aaPredicted RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 C2CD4AQ8NCU7 369 aaPredicted RBP8.4□□□□□ -1.06
LINC00458-203ENST00000451744 CCDC39Q9UFE4 941 aa8.4□□□□□ -1.06
LINC00458-203ENST00000451744 KAT6BQ8WYB5 2073 aa8.4□□□□□ -1.06
LINC00458-203ENST00000451744 LRRC37A3O60309 1634 aa8.4□□□□□ -1.07
LINC00458-203ENST00000451744 NSD3Q9BZ95 1437 aa8.39□□□□□ -1.07
LINC00458-203ENST00000451744 ANKRD36BQ8N2N9 1353 aa8.39□□□□□ -1.07
LINC00458-203ENST00000451744 ADMP35318 185 aa8.39□□□□□ -1.07
LINC00458-203ENST00000451744 TMF1P82094 1093 aa8.39□□□□□ -1.07
LINC00458-203ENST00000451744 CPDO75976 1380 aa8.38□□□□□ -1.07
LINC00458-203ENST00000451744 USP31Q70CQ4 1352 aa8.38□□□□□ -1.07
LINC00458-203ENST00000451744 SOX4Q06945 474 aaPredicted RBP8.38□□□□□ -1.07
LINC00458-203ENST00000451744 VPS72Q15906 364 aa8.38□□□□□ -1.07
LINC00458-203ENST00000451744 TBC1D32Q96NH3 1257 aa8.38□□□□□ -1.07
LINC00458-203ENST00000451744 METTL22Q9BUU2 404 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms