RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 OPHN1O60890 802 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 DCTN3O75935 186 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 POLR2EP19388 210 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 TUBA1BP68363 451 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 BASP1P80723 227 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 FANCCQ00597 558 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 EXOSC9Q06265 439 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 KRT72Q14CN4 511 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TSC22D1Q15714 1073 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TRIM68Q6AZZ1 485 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ZNF449Q6P9G9 518 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CRELD2Q6UXH1 353 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 TUBA1AQ71U36 451 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ILDR1Q86SU0 546 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 VSIG1Q86XK7 387 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 OGFOD1Q8N543 542 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 MLKLQ8NB16 471 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 MSANTD4Q8NCY6 345 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TNIP2Q8NFZ5 429 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GRAMD1AQ96CP6 724 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 OPTNQ96CV9 577 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 MPP4Q96JB8 637 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TTC1Q99614 292 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SH3GL1Q99961 368 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PARD6BQ9BYG5 372 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 HAUS4Q9H6D7 363 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 HELLSQ9NRZ9 838 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TBC1D23Q9NUY8 699 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ZFATQ9P243 1243 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SEPT3Q9UH03 358 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CORO1CQ9ULV4 474 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 HYOU1Q9Y4L1 999 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GMEB1Q9Y692 573 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TACC3Q9Y6A5 838 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SAR1BQ9Y6B6 198 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ABCC3O15438 1527 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ATP2A1O14983 1001 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SART1O43290 800 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 TPD52L2O43399 206 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 PHACTR2O75167 634 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ALDH1L1O75891 902 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SASH1O94885 1247 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 GPTP24298 496 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CASP14P31944 242 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SYKP43405 635 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ACTN3Q08043 901 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 SCRN1Q12765 414 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CUL1Q13616 776 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.44□□□□□ -2.02
USP53-202ENST00000450251 SPTY2D1Q68D10 685 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 OLFML1Q6UWY5 402 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TMEM92Q6UXU6 159 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TTLL7Q6ZT98 887 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SYCE1Q8N0S2 351 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TMEM57Q8N5G2 664 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CFAP61Q8NHU2 1237 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 RNF217Q8TC41 542 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CUL5Q93034 780 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ABTB1Q969K4 478 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 AKT1S1Q96B36 256 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PANX2Q96RD6 677 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TRIM55Q9BYV6 548 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 KIF9Q9HAQ2 790 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CEP126Q9P2H0 1117 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 WWC3Q9ULE0 1092 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TSC22D4Q9Y3Q8 395 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SLC4A7Q9Y6M7 1214 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SYCP2Q9BX26 1530 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 FRMD3A2A2Y4 597 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CCDC162PA2VCL2 907 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 MAGEA13PA6NCF6 341 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CCDC169A6NNP5 214 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 XPO1O14980 1071 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 MAN1A2O60476 641 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CLASP2O75122 1294 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 RPSAP08865 295 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 IDEP14735 1019 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 NR1D1P20393 614 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SCP2P22307 547 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 MLH1P40692 756 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 AMPD3Q01432 767 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 STX3Q13277 289 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PDXDC1Q6P996 788 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 SMCR8Q8TEV9 937 aaPredicted RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 MAIP1Q8WWC4 291 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PALMDQ9NP74 551 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PAPOLBQ9NRJ5 636 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 ASXL2Q76L83 1435 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 ANO9A1A5B4 782 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TSPY2A6NKD2 308 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 PPIP5K2O43314 1243 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 STRNO43815 780 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 KRT75O95678 551 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CLTAP09496 248 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TSPY3P0CV98 308 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TSPY8P0CW00 308 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 CCDC166P0CW27 439 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 FNTAP49354 379 aa2.44□□□□□ -2.02
USP53-202ENST00000450251 TMED10P49755 219 aaKnown RBP2.44□□□□□ -2.02
USP53-202ENST00000450251 TSPY1Q01534 308 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms