RNA–Protein interactions for RNA: ENST00000448190.6

SNHG4-201, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 4

Gene SNHG4, Length 542 nt, Biotype processed transcript, Subcellular localisation Nucleoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-201ENST00000448190 ZNF296Q8WUU4 475 aaPredicted RBP15.89■□□□□ 0.13
SNHG4-201ENST00000448190 TBC1D2Q9BYX2 928 aa15.89■□□□□ 0.13
SNHG4-201ENST00000448190 PRDM10Q9NQV6 1147 aa15.89■□□□□ 0.13
SNHG4-201ENST00000448190 CPA4Q9UI42 421 aa15.89■□□□□ 0.13
SNHG4-201ENST00000448190 C19orf81C9J6K1 198 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 ZNF213O14771 459 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 SGSM2O43147 1006 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 RAD21O60216 631 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 RANBP6O60518 1105 aaKnown RBP15.88■□□□□ 0.13
SNHG4-201ENST00000448190 EEF2P13639 858 aaKnown RBP15.88■□□□□ 0.13
SNHG4-201ENST00000448190 SH3D19Q5HYK7 790 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 KIAA1755Q5JYT7 1200 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 CHMP4CQ96CF2 233 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 ANAPC4Q9UJX5 808 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 AGTPBP1Q9UPW5 1226 aa15.88■□□□□ 0.13
SNHG4-201ENST00000448190 OTOFQ9HC10 1997 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 ICA1Q05084 483 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 PROCA1Q8NCQ7 364 aaPredicted RBP15.87■□□□□ 0.13
SNHG4-201ENST00000448190 NKX2-3Q8TAU0 364 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 DSCC1Q9BVC3 393 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 NBPF3Q9H094 633 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 KANSL2Q9H9L4 492 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 ZNF287Q9HBT7 754 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 CLIP2Q9UDT6 1046 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 SIPA1L1O43166 1804 aa15.87■□□□□ 0.13
SNHG4-201ENST00000448190 THSD7BQ9C0I4 1608 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 NMT2O60551 498 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TLR2O60603 784 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 PEX10O60683 326 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 FKTNO75072 461 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TSPY3P0CV98 308 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TSPY8P0CW00 308 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 SPICE1Q8N0Z3 855 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 P2RX7Q99572 595 aaKnown RBP15.86■□□□□ 0.13
SNHG4-201ENST00000448190 CFHR5Q9BXR6 569 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 KIAA1683Q9H0B3 1180 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 ASCC2Q9H1I8 757 aaPredicted RBP15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TAOK2Q9UL54 1235 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.86■□□□□ 0.13
SNHG4-201ENST00000448190 ROBO3Q96MS0 1386 aa15.86■□□□□ 0.13
SNHG4-201ENST00000448190 TSPY2A6NKD2 308 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 OSBPP22059 807 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 USP14P54578 494 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 SP3Q02447 781 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 SAMD1Q6SPF0 538 aaPredicted RBP15.85■□□□□ 0.13
SNHG4-201ENST00000448190 MFSD6Q6ZSS7 791 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 ESYT1Q9BSJ8 1104 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 ARHGEF10LQ9HCE6 1279 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 ZCCHC17Q9NP64 241 aaKnown RBP15.85■□□□□ 0.13
SNHG4-201ENST00000448190 CTNNA3Q9UI47 895 aa15.85■□□□□ 0.13
SNHG4-201ENST00000448190 CDK5RAP2Q96SN8 1893 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 CAP1Q01518 475 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 IMMTQ16891 758 aaKnown RBP15.84■□□□□ 0.13
SNHG4-201ENST00000448190 AKNAD1Q5T1N1 836 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 C17orf99Q6UX52 265 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 KIAA1211Q6ZU35 1233 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 NEDD1Q8NHV4 660 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 CD99L2Q8TCZ2 262 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 SMCR8Q8TEV9 937 aaPredicted RBP15.84■□□□□ 0.13
SNHG4-201ENST00000448190 CEP95Q96GE4 821 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 PARK7Q99497 189 aaKnown RBP15.84■□□□□ 0.13
SNHG4-201ENST00000448190 MTMR4Q9NYA4 1195 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 TMX2Q9Y320 296 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 RAD50Q92878 1312 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 MYH1P12882 1939 aa15.84■□□□□ 0.13
SNHG4-201ENST00000448190 IGKV6D-41A0A0C4DH26 115 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 ORC4O43929 436 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 CDC45O75419 566 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 FGRP09769 529 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 VCAM1P19320 739 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 IRX3P78415 501 aaPredicted RBP15.83■□□□□ 0.12
SNHG4-201ENST00000448190 PABPC4Q13310 644 aaKnown RBP eCLIP15.83■□□□□ 0.12
SNHG4-201ENST00000448190 ANKRD13CQ8N6S4 541 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 ARHGAP39Q9C0H5 1083 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 RPAP3Q9H6T3 665 aaPredicted RBP15.83■□□□□ 0.12
SNHG4-201ENST00000448190 IL17RBQ9NRM6 502 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 SLC45A1Q9Y2W3 748 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 TAF6LQ9Y6J9 622 aa15.83■□□□□ 0.12
SNHG4-201ENST00000448190 FOCADQ5VW36 1801 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 NAV1Q8NEY1 1877 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L15C9J2P7 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L13C9JLJ4 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L11C9JVI0 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L18D6R9N7 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L22D6RA61 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L17D6RBQ6 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L19D6RCP7 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L20D6RJB6 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 HOXA7P31268 230 aaPredicted RBP15.82■□□□□ 0.12
SNHG4-201ENST00000448190 USP17L24Q0WX57 530 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 CATSPERGQ6ZRH7 1159 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 LRRC47Q8N1G4 583 aaKnown RBP15.82■□□□□ 0.12
SNHG4-201ENST00000448190 MAP4K1Q92918 833 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 NUP88Q99567 741 aaPredicted RBP15.82■□□□□ 0.12
SNHG4-201ENST00000448190 ZKSCAN3Q9BRR0 538 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 LSG1Q9H089 658 aaKnown RBP15.82■□□□□ 0.12
SNHG4-201ENST00000448190 VCPKMTQ9H867 229 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 ANO2Q9NQ90 1003 aa15.82■□□□□ 0.12
SNHG4-201ENST00000448190 NYAP2Q9P242 653 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms