RNA–Protein interactions for RNA: ENST00000447025.6

MCF2L2-203, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 1 (best) BASIC

Gene MCF2L2, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-203ENST00000447025 MAGI3Q5TCQ9 1506 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 NUP153P49790 1475 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 CARMIL2Q6F5E8 1435 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 MAP3K5Q99683 1374 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 CCDC171Q6TFL3 1326 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 PALM3A6NDB9 673 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 STXBP3O00186 592 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 PER1O15534 1290 aaPredicted RBP9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 FGAP02671 866 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 POLR2FP61218 127 aaKnown RBP9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 DAAM2Q86T65 1068 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 KIRREL3Q8IZU9 778 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 MSANTD4Q8NCY6 345 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 TBC1D20Q96BZ9 403 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 ATXN10Q9UBB4 475 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 SERPINA10Q9UK55 444 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 TMCO1Q9UM00 188 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 EFR3BQ9Y2G0 817 aa9.69□□□□□ -0.86
MCF2L2-203ENST00000447025 A0A1B0GVG6 124 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 SYCE3A1L190 88 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 TMCC1O94876 653 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 CSPG5O95196 566 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 TBC1D8O95759 1140 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 CCDC166P0CW27 439 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 GNAI1P63096 354 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 EGFLAMQ63HQ2 1017 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 UNC5DQ6UXZ4 953 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 TRPC4APQ8TEL6 797 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 RUNDC1Q96C34 613 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 ASAP1Q9ULH1 1129 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 FAM169AQ9Y6X4 670 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 MYPNQ86TC9 1320 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 ZNF254O75437 659 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 PSMA3P25788 255 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 SLC8A1P32418 973 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 USP5P45974 858 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 GNAQP50148 359 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 SMTNP53814 917 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 SIM2Q14190 667 aaPredicted RBP9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 GRAMD2AQ8IUY3 354 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 SGCDQ92629 289 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 TMEM87BQ96K49 555 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 KLC4Q9NSK0 619 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 FYCO1Q9BQS8 1478 aa9.68□□□□□ -0.86
MCF2L2-203ENST00000447025 TIAM1Q13009 1591 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 DIAPH2O60879 1101 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 COL6A1P12109 1028 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 CASTP20810 708 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 SLC16A2P36021 539 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 POU5F1BQ06416 359 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 BZW1Q7L1Q6 419 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 SYT2Q8N9I0 419 aaPredicted RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 GDAP1Q8TB36 358 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 DEPTORQ8TB45 409 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 KLHDC4Q8TBB5 520 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 C8orf48Q96LL4 319 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 UBE2OQ9C0C9 1292 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 CASS4Q9NQ75 786 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 PPRC1Q5VV67 1664 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 RNASEH2AO75792 299 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 ATG7O95352 703 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 PAK2Q13177 524 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 ITGA7Q13683 1181 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 TMEM53Q6P2H8 277 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 CACTINQ8WUQ7 758 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 USP26Q9BXU7 913 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 DDX21Q9NR30 783 aaKnown RBP eCLIP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 MYO1AQ9UBC5 1043 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 TRPC6Q9Y210 931 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 CAPN7Q9Y6W3 813 aa9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 EPRSP07814 1512 aaKnown RBP9.67□□□□□ -0.86
MCF2L2-203ENST00000447025 C2orf81A6NN90 581 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 BTBD11A6QL63 1104 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 ELL2O00472 640 aaPredicted RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 TEX28O15482 410 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 FUT4P22083 530 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 NFE2L2Q16236 605 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 LRRFIP1Q32MZ4 808 aaKnown RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CFAP157Q5JU67 520 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 PI16Q6UXB8 463 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 OSTM1Q86WC4 334 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 ZNF713Q8N859 430 aaPredicted RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 SPAG5Q96R06 1193 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CCT7Q99832 543 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 EIF2AQ9BY44 585 aaKnown RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 DNAI2Q9GZS0 605 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 PARVGQ9HBI0 331 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 PREBQ9HCU5 417 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 KCTD5Q9NXV2 234 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 HDAC9Q9UKV0 1011 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 A6NHS1 94 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 TSPAN1O60635 241 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 PRPF40AO75400 957 aaKnown RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 SASH3O75995 380 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 MLH1P40692 756 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CCDC89Q8N998 374 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 ACSBG1Q96GR2 724 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CNNM2Q9H8M5 875 aa9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CLK4Q9HAZ1 481 aaKnown RBP9.66□□□□□ -0.86
MCF2L2-203ENST00000447025 CIDEBQ9UHD4 219 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms