RNA–Protein interactions for RNA: ENST00000444942.1

LINC00642-203, long intergenic non-protein coding RNA 642, humanhuman

TSL 1 (best)

Gene LINC00642, Length 1,376 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-203ENST00000444942 RWDD1Q9H446 243 aaPredicted RBP11.24□□□□□ -0.61
LINC00642-203ENST00000444942 DCTPP1Q9H773 170 aa11.24□□□□□ -0.61
LINC00642-203ENST00000444942 RAI14Q9P0K7 980 aa11.24□□□□□ -0.61
LINC00642-203ENST00000444942 LRP2BPQ9P2M1 347 aa11.24□□□□□ -0.61
LINC00642-203ENST00000444942 ATP11BQ9Y2G3 1177 aa11.24□□□□□ -0.61
LINC00642-203ENST00000444942 CHD7Q9P2D1 2997 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 MAST3O60307 1309 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 PRR33A8MZF0 331 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 IGHDP01880 384 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 CCND3P30281 292 aaPredicted RBP11.23□□□□□ -0.61
LINC00642-203ENST00000444942 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 GADL1Q6ZQY3 521 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 ZGPATQ8N5A5 531 aaKnown RBP11.23□□□□□ -0.61
LINC00642-203ENST00000444942 DNAJC2Q99543 621 aaKnown RBP11.23□□□□□ -0.61
LINC00642-203ENST00000444942 PRDM5Q9NQX1 630 aaPredicted RBP11.23□□□□□ -0.61
LINC00642-203ENST00000444942 TRANK1O15050 2925 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 ZNF318Q5VUA4 2279 aa11.23□□□□□ -0.61
LINC00642-203ENST00000444942 GBF1Q92538 1859 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 CACNA1BQ00975 2339 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 DOCK2Q92608 1830 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 PI4K2BG5E9Z4 385 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 CYP2E1P05181 493 aaPredicted RBP11.22□□□□□ -0.61
LINC00642-203ENST00000444942 XRCC5P13010 732 aaKnown RBP11.22□□□□□ -0.61
LINC00642-203ENST00000444942 CYP2B6P20813 491 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 MECOMQ03112 1051 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 ANKRD45Q5TZF3 282 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 TSHZ3Q63HK5 1081 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 SPTY2D1Q68D10 685 aaPredicted RBP11.22□□□□□ -0.61
LINC00642-203ENST00000444942 KCNH6Q9H252 994 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 BOLA2Q9H3K6 86 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 ANTXR1Q9H6X2 564 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 PIH1D3Q9NQM4 214 aaKnown RBP11.22□□□□□ -0.61
LINC00642-203ENST00000444942 DAGLAQ9Y4D2 1042 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 SALL1Q9NSC2 1324 aa11.22□□□□□ -0.61
LINC00642-203ENST00000444942 MYH7P12883 1935 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 DOCK1Q14185 1865 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 CDK5RAP2Q96SN8 1893 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 IGFBP4P22692 258 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 PDE4AP27815 886 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 EPHB4P54760 987 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 APOBEC3HQ6NTF7 200 aaKnown RBP11.21□□□□□ -0.61
LINC00642-203ENST00000444942 EDC3Q96F86 508 aaKnown RBP11.21□□□□□ -0.61
LINC00642-203ENST00000444942 ZDHHC15Q96MV8 337 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 PDLIM7Q9NR12 457 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 USP40Q9NVE5 1235 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 ZBTB47Q9UFB7 747 aaPredicted RBP11.21□□□□□ -0.61
LINC00642-203ENST00000444942 SUGT1Q9Y2Z0 365 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 LOC285556D6RIA3 1793 aa11.21□□□□□ -0.61
LINC00642-203ENST00000444942 CACNA1GO43497 2377 aa11.21□□□□□ -0.62
LINC00642-203ENST00000444942 TRIM43BA6NCK2 446 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 IDH1O75874 414 aaKnown RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 RGS3P49796 1198 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 HDLBPQ00341 1268 aaKnown RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 TCP10Q12799 353 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 HHIPL2Q6UWX4 724 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 SH3RF1Q7Z6J0 888 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 SKAP1Q86WV1 359 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 TRMT44Q8IYL2 757 aaKnown RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 OTUD7AQ8TE49 926 aaPredicted RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 ZNF384Q8TF68 577 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 TRIM43Q96BQ3 446 aaPredicted RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 FBXL18Q96ME1 805 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 BACH2Q9BYV9 841 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 TMOD2Q9NZR1 351 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 AFG3L2Q9Y4W6 797 aa11.2□□□□□ -0.62
LINC00642-203ENST00000444942 PDS5AQ29RF7 1337 aaKnown RBP11.2□□□□□ -0.62
LINC00642-203ENST00000444942 DNM1LO00429 736 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 GOLIM4O00461 696 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 ERC2O15083 957 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 ST18O60284 1047 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 MAP4K4O95819 1239 aaPredicted RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 ZKSCAN1P17029 563 aaPredicted RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 ANP32AP39687 249 aaKnown RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 BTDP43251 543 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 NAA16Q6N069 864 aaPredicted RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 CDC42EP5Q6NZY7 148 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 SLC39A5Q6ZMH5 540 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 PNMA3Q9UL41 463 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 AGTPBP1Q9UPW5 1226 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 ZHX2Q9Y6X8 837 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 MROH7-TTC4A0A0A0MT08 1334 aa11.19□□□□□ -0.62
LINC00642-203ENST00000444942 PRRC2BQ5JSZ5 2229 aaKnown RBP11.19□□□□□ -0.62
LINC00642-203ENST00000444942 TLL1O43897 1013 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 GSTO1P78417 241 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 PICALMQ13492 652 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 HDAC1Q13547 482 aaPredicted RBP11.18□□□□□ -0.62
LINC00642-203ENST00000444942 SNX17Q15036 470 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 SLF2Q8IX21 1173 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 MAGEB6Q8N7X4 407 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 NSUN4Q96CB9 384 aaKnown RBP11.18□□□□□ -0.62
LINC00642-203ENST00000444942 ZNF512BQ96KM6 892 aaPredicted RBP11.18□□□□□ -0.62
LINC00642-203ENST00000444942 NUDT12Q9BQG2 462 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 PBX4Q9BYU1 374 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 LNPKQ9C0E8 428 aa11.18□□□□□ -0.62
LINC00642-203ENST00000444942 LDHCP07864 332 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 PTPRAP18433 802 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 CYP7A1P22680 504 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 ITGB8P26012 769 aa11.17□□□□□ -0.62
LINC00642-203ENST00000444942 PBX2P40425 430 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms