RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 SH3TC2Q8TF17 1288 aa25.25■■□□□ 1.63
CDKN3-204ENST00000442975 TNPO2O14787 897 aaKnown RBP25.24■■□□□ 1.63
CDKN3-204ENST00000442975 IGHDP01880 384 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 APPP05067 770 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 AKR1B1P15121 316 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 GUCY1A2P33402 732 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 TDO2P48775 406 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 USP14P54578 494 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 PRKCZQ05513 592 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 TMEM179Q6ZVK1 233 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 STAP2Q9UGK3 403 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 MYH7P12883 1935 aa25.24■■□□□ 1.63
CDKN3-204ENST00000442975 GSG1L2A8MUP6 293 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 GNAT2P19087 354 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 CDK8P49336 464 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 C16orf86Q6ZW13 317 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 NBPF11Q86T75 865 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 STK11IPQ8N1F8 1099 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 SEC62Q99442 399 aaKnown RBP25.23■■□□□ 1.63
CDKN3-204ENST00000442975 KIAA1683Q9H0B3 1180 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 EPB41L4AQ9HCS5 686 aaPredicted RBP25.23■■□□□ 1.63
CDKN3-204ENST00000442975 TAOK2Q9UL54 1235 aa25.23■■□□□ 1.63
CDKN3-204ENST00000442975 MINDY4BA8MYZ0 360 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 VCAM1P19320 739 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 HOXA7P31268 230 aaPredicted RBP25.22■■□□□ 1.63
CDKN3-204ENST00000442975 HERVK_113P62684 666 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 CLEC10AQ8IUN9 316 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 ZNF333Q96JL9 665 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 C12orf42Q96LP6 360 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 CENPFP49454 3210 aa25.22■■□□□ 1.63
CDKN3-204ENST00000442975 ICA1Q05084 483 aa25.21■■□□□ 1.63
CDKN3-204ENST00000442975 CHD1LQ86WJ1 897 aa25.21■■□□□ 1.63
CDKN3-204ENST00000442975 EVI5LQ96CN4 794 aa25.21■■□□□ 1.63
CDKN3-204ENST00000442975 P2RX7Q99572 595 aaKnown RBP25.21■■□□□ 1.63
CDKN3-204ENST00000442975 ZMYM1Q5SVZ6 1142 aa25.2■■□□□ 1.62
CDKN3-204ENST00000442975 GIMAP6Q6P9H5 292 aa25.2■■□□□ 1.62
CDKN3-204ENST00000442975 GABRQQ9UN88 632 aa25.2■■□□□ 1.62
CDKN3-204ENST00000442975 PEX10O60683 326 aa25.19■■□□□ 1.62
CDKN3-204ENST00000442975 COA7Q96BR5 231 aa25.19■■□□□ 1.62
CDKN3-204ENST00000442975 CCDC17Q96LX7 622 aa25.19■■□□□ 1.62
CDKN3-204ENST00000442975 PAGR1Q9BTK6 254 aa25.19■■□□□ 1.62
CDKN3-204ENST00000442975 NACAP1Q9BZK3 213 aa25.19■■□□□ 1.62
CDKN3-204ENST00000442975 A0A1W2PRG0 241 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L15C9J2P7 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L13C9JLJ4 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L11C9JVI0 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L18D6R9N7 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L22D6RA61 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L17D6RBQ6 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L19D6RCP7 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L20D6RJB6 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 ATP2B2Q01814 1243 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 NUCB1Q02818 461 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 USP17L24Q0WX57 530 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 SBK1Q52WX2 424 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 CCDC129Q6ZRS4 1044 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 RPAP3Q9H6T3 665 aaPredicted RBP25.18■■□□□ 1.62
CDKN3-204ENST00000442975 ARHGEF10LQ9HCE6 1279 aa25.18■■□□□ 1.62
CDKN3-204ENST00000442975 POTEFA5A3E0 1075 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 TRIM6-TRIM34B2RNG4 842 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 GRK4P32298 578 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 FLT3LGP49771 235 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 GTF3C2Q8WUA4 911 aaPredicted RBP25.17■■□□□ 1.62
CDKN3-204ENST00000442975 TMEM106CQ9BVX2 250 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 MKNK2Q9HBH9 465 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 TXNRD2Q9NNW7 524 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 MORF4L1Q9UBU8 362 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 BIN2Q9UBW5 565 aaPredicted RBP25.17■■□□□ 1.62
CDKN3-204ENST00000442975 BAZ2AQ9UIF9 1905 aaKnown RBP25.17■■□□□ 1.62
CDKN3-204ENST00000442975 ROBO3Q96MS0 1386 aa25.17■■□□□ 1.62
CDKN3-204ENST00000442975 PATL2C9JE40 543 aaKnown RBP25.16■■□□□ 1.62
CDKN3-204ENST00000442975 IFNL3Q8IZI9 196 aa25.16■■□□□ 1.62
CDKN3-204ENST00000442975 GPRC5AQ8NFJ5 357 aa25.16■■□□□ 1.62
CDKN3-204ENST00000442975 TANGO6Q9C0B7 1094 aa25.16■■□□□ 1.62
CDKN3-204ENST00000442975 NAPBQ9H115 298 aa25.16■■□□□ 1.62
CDKN3-204ENST00000442975 SH2D4AQ9H788 454 aa25.16■■□□□ 1.62
CDKN3-204ENST00000442975 SLAIN1Q8ND83 568 aa25.15■■□□□ 1.62
CDKN3-204ENST00000442975 CATSPERGQ6ZRH7 1159 aa25.14■■□□□ 1.62
CDKN3-204ENST00000442975 CCAR1Q8IX12 1150 aaKnown RBP25.14■■□□□ 1.62
CDKN3-204ENST00000442975 SPICE1Q8N0Z3 855 aa25.14■■□□□ 1.62
CDKN3-204ENST00000442975 RILPL2Q969X0 211 aa25.14■■□□□ 1.62
CDKN3-204ENST00000442975 ADCY3O60266 1144 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 PRDM1O75626 825 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 ELNP15502 786 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 ERVK-9P63128 1117 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 ERVK-24P63145 666 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 CWC22Q9HCG8 908 aaKnown RBP25.13■■□□□ 1.61
CDKN3-204ENST00000442975 RBPJLQ9UBG7 517 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 BRCA2P51587 3418 aa25.13■■□□□ 1.61
CDKN3-204ENST00000442975 RAD21O60216 631 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 EEF2P13639 858 aaKnown RBP25.12■■□□□ 1.61
CDKN3-204ENST00000442975 RASA1P20936 1047 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 PLEKHM2Q8IWE5 1019 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 FAM227BQ96M60 508 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 KANSL2Q9H9L4 492 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 ZNF287Q9HBT7 754 aa25.12■■□□□ 1.61
CDKN3-204ENST00000442975 A0A0D9SFI3 127 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 UBXN2AP68543 259 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 MTFR1Q15390 333 aa25.11■■□□□ 1.61
CDKN3-204ENST00000442975 KIAA1755Q5JYT7 1200 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms