RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 LNPKQ9C0E8 428 aa26.56■■□□□ 1.84
HDLBP-220ENST00000442730 KIAA1683Q9H0B3 1180 aa26.56■■□□□ 1.84
HDLBP-220ENST00000442730 MPHOSPH10O00566 681 aaKnown RBP26.55■■□□□ 1.84
HDLBP-220ENST00000442730 MLLT1Q03111 559 aaPredicted RBP26.55■■□□□ 1.84
HDLBP-220ENST00000442730 ZYXQ15942 572 aaKnown RBP26.55■■□□□ 1.84
HDLBP-220ENST00000442730 GIMAP6Q6P9H5 292 aa26.55■■□□□ 1.84
HDLBP-220ENST00000442730 C16orf86Q6ZW13 317 aa26.55■■□□□ 1.84
HDLBP-220ENST00000442730 ZNF333Q96JL9 665 aa26.55■■□□□ 1.84
HDLBP-220ENST00000442730 EPB41L4AQ9HCS5 686 aaPredicted RBP26.55■■□□□ 1.84
HDLBP-220ENST00000442730 MYPNQ86TC9 1320 aa26.55■■□□□ 1.84
HDLBP-220ENST00000442730 MGAMO43451 1857 aa26.55■■□□□ 1.84
HDLBP-220ENST00000442730 HOXD10P28358 340 aa26.54■■□□□ 1.84
HDLBP-220ENST00000442730 CDK8P49336 464 aa26.54■■□□□ 1.84
HDLBP-220ENST00000442730 USP14P54578 494 aa26.54■■□□□ 1.84
HDLBP-220ENST00000442730 PRKCZQ05513 592 aa26.54■■□□□ 1.84
HDLBP-220ENST00000442730 TMEM179Q6ZVK1 233 aa26.54■■□□□ 1.84
HDLBP-220ENST00000442730 MYH8P13535 1937 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 BRCA2P51587 3418 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 AKR1B1P15121 316 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 GNAT2P19087 354 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 ZMYM1Q5SVZ6 1142 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 B4GALNT3Q6L9W6 998 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 SEC62Q99442 399 aaKnown RBP26.53■■□□□ 1.84
HDLBP-220ENST00000442730 ROBO3Q96MS0 1386 aa26.53■■□□□ 1.84
HDLBP-220ENST00000442730 VCAM1P19320 739 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 HERVK_113P62684 666 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 NUCB1Q02818 461 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 SBK1Q52WX2 424 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 RBBP6Q7Z6E9 1792 aaKnown RBP26.52■■□□□ 1.84
HDLBP-220ENST00000442730 SH3TC2Q8TF17 1288 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 P2RX7Q99572 595 aaKnown RBP26.52■■□□□ 1.84
HDLBP-220ENST00000442730 MORF4L1Q9UBU8 362 aa26.52■■□□□ 1.84
HDLBP-220ENST00000442730 TNPO2O14787 897 aaKnown RBP26.51■■□□□ 1.83
HDLBP-220ENST00000442730 CHD1LQ86WJ1 897 aa26.51■■□□□ 1.83
HDLBP-220ENST00000442730 EVI5LQ96CN4 794 aa26.51■■□□□ 1.83
HDLBP-220ENST00000442730 A0A1W2PRG0 241 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 NBPF11Q86T75 865 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 CLEC10AQ8IUN9 316 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 RAET1EQ8TD07 263 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 CCDC17Q96LX7 622 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 GABRQQ9UN88 632 aa26.5■■□□□ 1.83
HDLBP-220ENST00000442730 TNRC18O15417 2968 aaPredicted RBP26.49■■□□□ 1.83
HDLBP-220ENST00000442730 TDO2P48775 406 aa26.49■■□□□ 1.83
HDLBP-220ENST00000442730 TXNRD2Q9NNW7 524 aa26.49■■□□□ 1.83
HDLBP-220ENST00000442730 POTEFA5A3E0 1075 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L15C9J2P7 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L13C9JLJ4 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L11C9JVI0 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L18D6R9N7 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L22D6RA61 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L17D6RBQ6 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L19D6RCP7 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L20D6RJB6 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 IRX6P78412 446 aaPredicted RBP26.48■■□□□ 1.83
HDLBP-220ENST00000442730 ICA1Q05084 483 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 USP17L24Q0WX57 530 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 POTEEQ6S8J3 1075 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 SIAH1Q8IUQ4 282 aa26.48■■□□□ 1.83
HDLBP-220ENST00000442730 PATL2C9JE40 543 aaKnown RBP26.47■■□□□ 1.83
HDLBP-220ENST00000442730 PEX10O60683 326 aa26.47■■□□□ 1.83
HDLBP-220ENST00000442730 APPP05067 770 aa26.47■■□□□ 1.83
HDLBP-220ENST00000442730 FLT3LGP49771 235 aa26.47■■□□□ 1.83
HDLBP-220ENST00000442730 GTF3C2Q8WUA4 911 aaPredicted RBP26.47■■□□□ 1.83
HDLBP-220ENST00000442730 GREB1LQ9C091 1923 aaPredicted RBP26.46■■□□□ 1.83
HDLBP-220ENST00000442730 MINDY4BA8MYZ0 360 aa26.46■■□□□ 1.83
HDLBP-220ENST00000442730 GRK4P32298 578 aa26.46■■□□□ 1.83
HDLBP-220ENST00000442730 CATSPERGQ6ZRH7 1159 aa26.46■■□□□ 1.83
HDLBP-220ENST00000442730 IFNL3Q8IZI9 196 aa26.46■■□□□ 1.83
HDLBP-220ENST00000442730 RPAP3Q9H6T3 665 aaPredicted RBP26.46■■□□□ 1.83
HDLBP-220ENST00000442730 RBPJLQ9UBG7 517 aa26.46■■□□□ 1.83
HDLBP-220ENST00000442730 CCDC129Q6ZRS4 1044 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 PLEKHM2Q8IWE5 1019 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 GPRC5AQ8NFJ5 357 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 COA7Q96BR5 231 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 NACAP1Q9BZK3 213 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 ARHGEF10LQ9HCE6 1279 aa26.45■■□□□ 1.82
HDLBP-220ENST00000442730 FOXP2O15409 715 aa26.44■■□□□ 1.82
HDLBP-220ENST00000442730 MYCP01106 439 aaPredicted RBP26.44■■□□□ 1.82
HDLBP-220ENST00000442730 RASA1P20936 1047 aa26.44■■□□□ 1.82
HDLBP-220ENST00000442730 KIAA1755Q5JYT7 1200 aa26.44■■□□□ 1.82
HDLBP-220ENST00000442730 SLAIN1Q8ND83 568 aa26.44■■□□□ 1.82
HDLBP-220ENST00000442730 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.44■■□□□ 1.82
HDLBP-220ENST00000442730 TMX2Q9Y320 296 aa26.44■■□□□ 1.82
HDLBP-220ENST00000442730 KIAA0100Q14667 2235 aaKnown RBP26.44■■□□□ 1.82
HDLBP-220ENST00000442730 ERVK-9P63128 1117 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 ERVK-24P63145 666 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 IRF5Q13568 498 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 TICAM2Q86XR7 235 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 STK11IPQ8N1F8 1099 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 PAGR1Q9BTK6 254 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 OSBPL3Q9H4L5 887 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 SH2D4AQ9H788 454 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 KANSL2Q9H9L4 492 aa26.43■■□□□ 1.82
HDLBP-220ENST00000442730 LBX2Q6XYB7 198 aa26.42■■□□□ 1.82
HDLBP-220ENST00000442730 LPAR1Q92633 364 aa26.42■■□□□ 1.82
HDLBP-220ENST00000442730 TMEM106CQ9BVX2 250 aa26.42■■□□□ 1.82
HDLBP-220ENST00000442730 NAPBQ9H115 298 aa26.42■■□□□ 1.82
HDLBP-220ENST00000442730 A0A0D9SFI3 127 aa26.41■■□□□ 1.82
HDLBP-220ENST00000442730 SPDYE16A6NNV3 312 aaPredicted RBP26.41■■□□□ 1.82
HDLBP-220ENST00000442730 ADCY3O60266 1144 aa26.41■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms