RNA–Protein interactions for RNA: ENST00000439247.2

PCNX3-202, Transcript of pecanex 3, humanhuman

TSL 1 (best)

Gene PCNX3, Length 3,104 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX3-202ENST00000439247 MSANTD4Q8NCY6 345 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 PLBD2Q8NHP8 589 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 EIF3CQ99613 913 aaKnown RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 FAM204AQ9H8W3 233 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 TOMM22Q9NS69 142 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 FBXO2Q9UK22 296 aaPredicted RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 A0A087X0B3 334 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 GOLGA8AA7E2F4 631 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 SARSP49591 514 aaKnown RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 IQUBQ8NA54 791 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 HNRNPLLQ8WVV9 542 aaKnown RBP15.4■□□□□ 0.06
PCNX3-202ENST00000439247 APPBP2Q92624 585 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 ZKSCAN3Q9BRR0 538 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 CEP126Q9P2H0 1117 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 LAMB4A4D0S4 1761 aa15.4■□□□□ 0.06
PCNX3-202ENST00000439247 CTAGE9A4FU28 777 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 FAM205CA6NFA0 338 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 USP5P45974 858 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 CEP112Q8N8E3 955 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 OXER1Q8TDS5 423 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 RABEP2Q9H5N1 569 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 MYH8P13535 1937 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 ENC1O14682 589 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 ZBTB43O43298 467 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 NOSTRINQ8IVI9 506 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 MLKLQ8NB16 471 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 HDAC6Q9UBN7 1215 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 ARFGEF2Q9Y6D5 1785 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 GYPCP04921 128 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 ERVK-24P63145 666 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 DIS3L2Q8IYB7 885 aaKnown RBP15.39■□□□□ 0.05
PCNX3-202ENST00000439247 CSRNP2Q9H175 543 aa15.39■□□□□ 0.05
PCNX3-202ENST00000439247 CWC25Q9NXE8 425 aaPredicted RBP15.39■□□□□ 0.05
PCNX3-202ENST00000439247 ACTN4O43707 911 aaKnown RBP15.38■□□□□ 0.05
PCNX3-202ENST00000439247 ONECUT3O60422 494 aaPredicted RBP15.38■□□□□ 0.05
PCNX3-202ENST00000439247 GSPT2Q8IYD1 628 aaKnown RBP15.38■□□□□ 0.05
PCNX3-202ENST00000439247 EPSTI1Q96J88 318 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 PANX2Q96RD6 677 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 GPR108Q9NPR9 543 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 PLCD1P51178 756 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 AKAP17AQ02040 695 aaKnown RBP15.38■□□□□ 0.05
PCNX3-202ENST00000439247 CTDSPL2Q05D32 466 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 TAF7LQ5H9L4 462 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 SLF1Q9BQI6 1058 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 TACC3Q9Y6A5 838 aa15.38■□□□□ 0.05
PCNX3-202ENST00000439247 SRGAP2O75044 1071 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 MFAP3LO75121 409 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 ERLIN1O75477 346 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 DPYDQ12882 1025 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 IGDCC4Q8TDY8 1250 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 EFCC1Q9HA90 598 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 HOOK1Q9UJC3 728 aaKnown RBP15.37■□□□□ 0.05
PCNX3-202ENST00000439247 ECM29Q5VYK3 1845 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 CTAGE15A4D2H0 777 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 MYO1BO43795 1136 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 EIF3JO75822 258 aaKnown RBP15.37■□□□□ 0.05
PCNX3-202ENST00000439247 CTAGE8P0CG41 777 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 CYP19A1P11511 503 aaPredicted RBP15.37■□□□□ 0.05
PCNX3-202ENST00000439247 ITPK1Q13572 414 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 TMEM67Q5HYA8 995 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 RASGRP2Q7LDG7 609 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 CTAGE6Q86UF2 777 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 CTAGE4Q8IX94 777 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 SYNE4Q8N205 404 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 LY9Q9HBG7 655 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 ADD3Q9UEY8 706 aaKnown RBP15.37■□□□□ 0.05
PCNX3-202ENST00000439247 IDH1O75874 414 aaKnown RBP15.37■□□□□ 0.05
PCNX3-202ENST00000439247 PTPREP23469 700 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 MCAMP43121 646 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 HSP90B2PQ58FF3 399 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 NT5DC1Q5TFE4 455 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 ZBTB1Q9Y2K1 713 aa15.37■□□□□ 0.05
PCNX3-202ENST00000439247 LOC102724428A0A0B4J2F2 783 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 RNF40O75150 1001 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 CDKL5O76039 1030 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 IVLP07476 585 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 GTF2A1P52655 376 aaPredicted RBP15.36■□□□□ 0.05
PCNX3-202ENST00000439247 SIK1P57059 783 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 IRX3P78415 501 aaPredicted RBP15.36■□□□□ 0.05
PCNX3-202ENST00000439247 hCG_1642624A0A1W2PR95 340 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 ATP6V1AP38606 617 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 ARHGAP25P42331 645 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 DRC1Q96MC2 740 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 NAPGQ99747 312 aaPredicted RBP15.36■□□□□ 0.05
PCNX3-202ENST00000439247 VPS16Q9H269 839 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 CABP5Q9NP86 173 aa15.36■□□□□ 0.05
PCNX3-202ENST00000439247 SYNRGQ9UMZ2 1314 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 SYF2O95926 243 aaKnown RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 PBX1P40424 430 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 SSRP1Q08945 709 aaKnown RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 TTC31Q49AM3 519 aaPredicted RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 RRP12Q5JTH9 1297 aaKnown RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 CPLX2Q6PUV4 134 aaKnown RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 CHP1Q99653 195 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 GUCA1BQ9UMX6 200 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 WNT7AO00755 349 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 SART3Q15020 963 aaKnown RBP15.35■□□□□ 0.05
PCNX3-202ENST00000439247 SMIM5Q71RC9 77 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 CAPZA3Q96KX2 299 aa15.35■□□□□ 0.05
PCNX3-202ENST00000439247 ZSWIM5Q9P217 1185 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms