RNA–Protein interactions for RNA: ENST00000439214.1

SNAP29-202, Transcript of synaptosome associated protein 29, humanhuman

TSL 3

Gene SNAP29, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP29-202ENST00000439214 OSBPL2Q9H1P3 480 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 CCDC86Q9H6F5 360 aaKnown RBP7.66□□□□□ -1.18
SNAP29-202ENST00000439214 CSADQ9Y600 493 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 CCDC144AA2RUR9 1427 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 UGGT1Q9NYU2 1555 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 E9PCH4 1651 aa7.66□□□□□ -1.18
SNAP29-202ENST00000439214 DCDC2CA8MYV0 355 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PIK3R2O00459 728 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 DDX3YO15523 660 aaKnown RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 GMPRP36959 345 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PTPN11Q06124 597 aaPredicted RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PDE4BQ07343 736 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 TRIM28Q13263 835 aaKnown RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 BMS1Q14692 1282 aaKnown RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 NOP9Q86U38 636 aaKnown RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PDZD3Q86UT5 571 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 REXO1Q8N1G1 1221 aaKnown RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 LRRC3Q9BY71 257 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PRDM6Q9NQX0 595 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 CEP170BQ9Y4F5 1589 aaPredicted RBP7.65□□□□□ -1.18
SNAP29-202ENST00000439214 SNCAIPQ9Y6H5 919 aa7.65□□□□□ -1.18
SNAP29-202ENST00000439214 PRAMEF27A3QJZ7 478 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 CCDC85CA6NKD9 419 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 ECEL1O95672 775 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 SLURP2P0DP57 97 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 PLCG1P19174 1290 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 CLCQ05315 142 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 SETDB1Q15047 1291 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 NBPF6Q5VWK0 638 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
SNAP29-202ENST00000439214 DTWD1Q8N5C7 304 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 OR6P1Q8NGX9 317 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 GAL3ST3Q96A11 431 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 NBPF4Q96M43 638 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 PRKAG3Q9UGI9 489 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 TMA7Q9Y2S6 64 aaKnown RBP7.64□□□□□ -1.19
SNAP29-202ENST00000439214 SPHKAPQ2M3C7 1700 aa7.64□□□□□ -1.19
SNAP29-202ENST00000439214 MED1Q15648 1581 aaPredicted RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 NOS1P29475 1434 aa7.63□□□□□ -1.19
SNAP29-202ENST00000439214 SMAD7O15105 426 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 ETF1P62495 437 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 LRRFIP1Q32MZ4 808 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 AKAP4Q5JQC9 854 aa7.63□□□□□ -1.19
SNAP29-202ENST00000439214 EXOSC6Q5RKV6 272 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 HNRNPLLQ8WVV9 542 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 PLPPR2Q96GM1 343 aa7.63□□□□□ -1.19
SNAP29-202ENST00000439214 SRPK1Q96SB4 655 aaKnown RBP7.63□□□□□ -1.19
SNAP29-202ENST00000439214 RUSC1Q9BVN2 902 aa7.63□□□□□ -1.19
SNAP29-202ENST00000439214 NID1P14543 1247 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 CHMP4BP1P59074 171 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 INPP5AQ14642 412 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 NUTM2GQ5VZR2 741 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 CDC37L1Q7L3B6 337 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 C12orf40Q86WS4 652 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 GALNT11Q8NCW6 608 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 SSU72Q9NP77 194 aaKnown RBP7.62□□□□□ -1.19
SNAP29-202ENST00000439214 ACTR10Q9NZ32 417 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 SIRPGQ9P1W8 387 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 PIK3C2BO00750 1634 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 SYNMO15061 1565 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 KIF1BO60333 1816 aa7.62□□□□□ -1.19
SNAP29-202ENST00000439214 LOC100289279A0A1B0GTE1 492 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 K7ELQ4 463 aaPredicted RBP7.61□□□□□ -1.19
SNAP29-202ENST00000439214 AOC2O75106 756 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 CANXP27824 592 aaKnown RBP7.61□□□□□ -1.19
SNAP29-202ENST00000439214 PRRT3Q5FWE3 981 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 LARP1BQ659C4 914 aaKnown RBP7.61□□□□□ -1.19
SNAP29-202ENST00000439214 LRFN4Q6PJG9 635 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 PODNQ7Z5L7 613 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 CYP4F12Q9HCS2 524 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 PTPRTO14522 1441 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 RIMS2Q9UQ26 1411 aa7.61□□□□□ -1.19
SNAP29-202ENST00000439214 ZNF142P52746 1687 aaPredicted RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 TMEM2Q9UHN6 1383 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 ZNF862O60290 1169 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 RNGTTO60942 597 aaKnown RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 CLSTN1O94985 981 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 PGRP06401 933 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 LORP23490 312 aaPredicted RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 LTKP29376 864 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 GIPRP48546 466 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 CDK8P49336 464 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 ID3Q02535 119 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 ACAD11Q709F0 780 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 FBXO11Q86XK2 927 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 FAM177A1Q8N128 213 aaPredicted RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 C12orf50Q8NA57 414 aaPredicted RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 UBASH3BQ8TF42 649 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 WDR89Q96FK6 387 aaPredicted RBP7.6□□□□□ -1.19
SNAP29-202ENST00000439214 SHDQ96IW2 340 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 SLC26A8Q96RN1 970 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 PLVAPQ9BX97 442 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 EHMT1Q9H9B1 1298 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 PIDD1Q9HB75 910 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 ST7Q9NRC1 585 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 KLHL3Q9UH77 587 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 ZNRF3Q9ULT6 936 aa7.6□□□□□ -1.19
SNAP29-202ENST00000439214 AP4E1Q9UPM8 1137 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms