RNA–Protein interactions for RNA: ENST00000435505.6

VRK2-206, Transcript of vaccinia related kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK2, Length 2,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-206ENST00000435505 ZNF232Q9UNY5 417 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 hCG_1984214I3L0E3 225 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 MBD3O95983 291 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 GSTT1P30711 240 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 PPM1FP49593 454 aaPredicted RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 FCGRTP55899 365 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 GALEQ14376 348 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 HLTFQ14527 1009 aaKnown RBP eCLIP7.13□□□□□ -1.27
VRK2-206ENST00000435505 SART3Q15020 963 aaKnown RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 RTN1Q16799 776 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 TMEM67Q5HYA8 995 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 CC2D1AQ6P1N0 951 aaPredicted RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 FAM196AQ6ZSG2 479 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 ZBTB46Q86UZ6 589 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 LSRQ86X29 649 aaPredicted RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 CPXCR1Q8N123 301 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 ZGPATQ8N5A5 531 aaKnown RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 ZNF511Q8NB15 262 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 TTC16Q8NEE8 873 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 PJA1Q8NG27 643 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 RIN3Q8TB24 985 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 C1QTNF2Q9BXJ5 285 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 STK26Q9P289 416 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.13□□□□□ -1.27
VRK2-206ENST00000435505 V9GYY5 206 aaPredicted RBP7.13□□□□□ -1.27
VRK2-206ENST00000435505 DAPK1P53355 1430 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 UHRF1BP1LA0JNW5 1464 aa7.13□□□□□ -1.27
VRK2-206ENST00000435505 DNMT1P26358 1616 aaKnown RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 POTECB2RU33 542 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 ABLIM3O94929 683 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 NBPF7P0C2Y1 421 aaPredicted RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 TFE3P19532 575 aaPredicted RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 RARSP54136 660 aaKnown RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 SATB1Q01826 763 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 DNAJC21Q5F1R6 531 aaKnown RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 C1QTNF12Q5T7M4 302 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 WWC2Q6AWC2 1192 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 LRRTM3Q86VH5 581 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 ZSWIM2Q8NEG5 633 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 WDR66Q8TBY9 1149 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 SARGQ9BW04 601 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 PHACTR1Q9C0D0 580 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 SAGE1Q9NXZ1 904 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 ITSN2Q9NZM3 1697 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 F13A1P00488 732 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 TNNT1P13805 278 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 LIG3P49916 1009 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 UVSSAQ2YD98 709 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 MSS51Q4VC12 460 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 ZKSCAN2Q63HK3 967 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 CCDC70Q6NSX1 233 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 TPTE2Q6XPS3 522 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 DRC7Q8IY82 874 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 RTF1Q92541 710 aaKnown RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 KIFC2Q96AC6 838 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 TRMT2BQ96GJ1 504 aaKnown RBP7.12□□□□□ -1.27
VRK2-206ENST00000435505 CHRDQ9H2X0 955 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 LRRC4BQ9NT99 713 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 PCDHGB3Q9Y5G1 929 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 ROCK1Q13464 1354 aa7.12□□□□□ -1.27
VRK2-206ENST00000435505 SERTM1A2A2V5 107 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 AP5Z1O43299 807 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 LRRC69Q6ZNQ3 347 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 GK5Q6ZS86 529 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 ZNF295-AS1Q8N0V1 137 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 SPC24Q8NBT2 197 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 SNX29Q8TEQ0 813 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 ANKRD24Q8TF21 1146 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 EXOC2Q96KP1 924 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 DDX20Q9UHI6 824 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 GOLGA6L6A8MZA4 724 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 UPK3BL1B0FP48 263 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 UPK3BL2E5RIL1 263 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 PHACTR2O75167 634 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 SARSP49591 514 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 PURAQ00577 322 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 PICALMQ13492 652 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 MVPQ14764 893 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 ELF2Q15723 593 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 COBLL1Q53SF7 1204 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 ARMC3Q5W041 872 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 LVRNQ6Q4G3 990 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 CLASRPQ8N2M8 674 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 CCDC191Q8NCU4 936 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 CCDC112Q8NEF3 446 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 ZFRQ96KR1 1074 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 STRBPQ96SI9 672 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 NCOA5Q9HCD5 579 aaKnown RBP7.11□□□□□ -1.27
VRK2-206ENST00000435505 DONSONQ9NYP3 566 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 AKAP2Q9Y2D5 859 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 JRKLQ9Y4A0 524 aa7.11□□□□□ -1.27
VRK2-206ENST00000435505 ATAD2BQ9ULI0 1458 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 RAD50Q92878 1312 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 GOLGA6CA6NDK9 693 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 GOLGA6BA6NDN3 693 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 GOLGA6DP0CG33 693 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 CCNFP41002 786 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 CLCQ05315 142 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 STAT4Q14765 748 aa7.1□□□□□ -1.27
VRK2-206ENST00000435505 GRM3Q14832 879 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms