RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 ENAHQ8N8S7 591 aaPredicted RBP27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 IGDCC4Q8TDY8 1250 aa27.27■■□□□ 1.96
SMARCAL1-208ENST00000434435 CELF2O95319 508 aaKnown RBP27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 GUCY1A2P33402 732 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 AK2P54819 239 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 FKBP1BP68106 108 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 JAG1P78504 1218 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 MAP3K9P80192 1104 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 RAB3GAP1Q15042 981 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 SEC23AQ15436 765 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 AGXT2Q9BYV1 514 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 KANSL2Q9H9L4 492 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 LY9Q9HBG7 655 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 MTMR4Q9NYA4 1195 aa27.26■■□□□ 1.95
SMARCAL1-208ENST00000434435 IFIT1BQ5T764 474 aaKnown RBP27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 DGKHQ86XP1 1220 aa27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 GBA2Q9HCG7 927 aaPredicted RBP27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 PICK1Q9NRD5 415 aa27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 STX8Q9UNK0 236 aa27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 CSADQ9Y600 493 aa27.25■■□□□ 1.95
SMARCAL1-208ENST00000434435 PTPRFP10586 1907 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 PASKQ96RG2 1323 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 LIFRP42702 1097 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 ICA1Q05084 483 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 TOB2Q14106 344 aaPredicted RBP27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 CLEC10AQ8IUN9 316 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 ANKRD13AQ8IZ07 590 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 TMTC2Q8N394 836 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 BRF1Q92994 677 aa27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 ZKSCAN4Q969J2 545 aaPredicted RBP27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 GPHNQ9NQX3 736 aaPredicted RBP27.24■■□□□ 1.95
SMARCAL1-208ENST00000434435 TTLL1O95922 423 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 NOVP48745 357 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 NFXL1Q6ZNB6 911 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 MOB2Q70IA6 237 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 C2orf69Q8N8R5 385 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 ANKS1AQ92625 1134 aa27.23■■□□□ 1.95
SMARCAL1-208ENST00000434435 CCDC69A6NI79 296 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 MCM2P49736 904 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 VGLL4Q14135 290 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 RCSD1Q6JBY9 416 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 PPP1R3FQ6ZSY5 799 aaPredicted RBP27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 ARHGEF10LQ9HCE6 1279 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 NYAP2Q9P242 653 aa27.22■■□□□ 1.95
SMARCAL1-208ENST00000434435 USP17L5A8MUK1 530 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 ATP2B2Q01814 1243 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 FSTL1Q12841 308 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 NOL8Q76FK4 1167 aaKnown RBP27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 SGMS1Q86VZ5 419 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 KAT14Q9H8E8 782 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 SNCAIPQ9Y6H5 919 aa27.21■■□□□ 1.95
SMARCAL1-208ENST00000434435 UNCXA6NJT0 531 aa27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 TOP1P11387 765 aaKnown RBP27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 EEF2P13639 858 aaKnown RBP27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 APOBRQ0VD83 1088 aa27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 SENP2Q9HC62 589 aa27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 CLIP2Q9UDT6 1046 aa27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 RBM19Q9Y4C8 960 aaKnown RBP27.2■■□□□ 1.94
SMARCAL1-208ENST00000434435 KLF18A0A0U1RQI7 1052 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 UBE2Q2LH0YL09 131 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 CD2BP2O95400 341 aaKnown RBP27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 PTPRAP18433 802 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 ANP32AP39687 249 aaKnown RBP27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 LDLRAD1Q5T700 205 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 SNX21Q969T3 373 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 TMEM47Q9BQJ4 181 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 TBC1D2Q9BYX2 928 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 AS3MTQ9HBK9 375 aa27.19■■□□□ 1.94
SMARCAL1-208ENST00000434435 CST9Q5W186 159 aa27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 SYNE3Q6ZMZ3 975 aa27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 SH2D4AQ9H788 454 aa27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 NAP1L2Q9ULW6 460 aaPredicted RBP27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 SYNPO2Q9UMS6 1093 aa27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 LIMCH1Q9UPQ0 1083 aa27.18■■□□□ 1.94
SMARCAL1-208ENST00000434435 APOA5Q6Q788 366 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 CATIPQ7Z7H3 387 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 CCDC84Q86UT8 332 aaPredicted RBP27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 HSCBQ8IWL3 235 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZNF654Q8IZM8 581 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 LRRC47Q8N1G4 583 aaKnown RBP27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 PNMA1Q8ND90 353 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 MKL1Q969V6 931 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 LARP6Q9BRS8 491 aaKnown RBP27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 ELP3Q9H9T3 547 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 SLC12A7Q9Y666 1083 aa27.17■■□□□ 1.94
SMARCAL1-208ENST00000434435 EVCP57679 992 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 CLMNQ96JQ2 1002 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 FEZ1Q99689 392 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 WDR18Q9BV38 432 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZBTB4Q9P1Z0 1013 aaPredicted RBP27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 BRPF3Q9ULD4 1205 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 TPCN1Q9ULQ1 816 aa27.16■■□□□ 1.94
SMARCAL1-208ENST00000434435 GOLGA8BA8MQT2 603 aa27.15■■□□□ 1.94
SMARCAL1-208ENST00000434435 DDAH1O94760 285 aa27.15■■□□□ 1.94
SMARCAL1-208ENST00000434435 SIAH1Q8IUQ4 282 aa27.15■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZSCAN31Q96LW9 406 aaPredicted RBP27.15■■□□□ 1.94
SMARCAL1-208ENST00000434435 SPDYE5A6NIY4 337 aa27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 ZBTB43O43298 467 aa27.14■■□□□ 1.94
SMARCAL1-208ENST00000434435 ERO1BQ86YB8 467 aa27.14■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms