RNA–Protein interactions for RNA: ENST00000433568.5

UBE2F-209, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 4

Gene UBE2F, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-209ENST00000433568 TRIM47Q96LD4 638 aa23.56■■□□□ 1.36
UBE2F-209ENST00000433568 SWAP70Q9UH65 585 aa23.56■■□□□ 1.36
UBE2F-209ENST00000433568 A0A1W2PRG0 241 aa23.55■■□□□ 1.36
UBE2F-209ENST00000433568 C19orf81C9J6K1 198 aa23.55■■□□□ 1.36
UBE2F-209ENST00000433568 PATL2C9JE40 543 aaKnown RBP23.55■■□□□ 1.36
UBE2F-209ENST00000433568 KIF22Q14807 665 aa23.55■■□□□ 1.36
UBE2F-209ENST00000433568 USP17L2Q6R6M4 530 aa23.55■■□□□ 1.36
UBE2F-209ENST00000433568 IFNL3Q8IZI9 196 aa23.55■■□□□ 1.36
UBE2F-209ENST00000433568 P2RX7Q99572 595 aaKnown RBP23.55■■□□□ 1.36
UBE2F-209ENST00000433568 ARPP21Q9UBL0 812 aaPredicted RBP23.55■■□□□ 1.36
UBE2F-209ENST00000433568 A0A0D9SFI3 127 aa23.54■■□□□ 1.36
UBE2F-209ENST00000433568 FOXP2O15409 715 aa23.54■■□□□ 1.36
UBE2F-209ENST00000433568 FMNL1O95466 1100 aaPredicted RBP23.54■■□□□ 1.36
UBE2F-209ENST00000433568 OSBPP22059 807 aa23.53■■□□□ 1.36
UBE2F-209ENST00000433568 NMIQ13287 307 aaPredicted RBP23.53■■□□□ 1.36
UBE2F-209ENST00000433568 SBK1Q52WX2 424 aa23.53■■□□□ 1.36
UBE2F-209ENST00000433568 KIAA1755Q5JYT7 1200 aa23.53■■□□□ 1.36
UBE2F-209ENST00000433568 VPS53Q5VIR6 699 aa23.53■■□□□ 1.36
UBE2F-209ENST00000433568 PNMA3Q9UL41 463 aa23.53■■□□□ 1.36
UBE2F-209ENST00000433568 PRDM1O75626 825 aa23.52■■□□□ 1.36
UBE2F-209ENST00000433568 GNAT2P19087 354 aa23.52■■□□□ 1.36
UBE2F-209ENST00000433568 IRX3P78415 501 aaPredicted RBP23.52■■□□□ 1.36
UBE2F-209ENST00000433568 SIAH1Q8IUQ4 282 aa23.52■■□□□ 1.36
UBE2F-209ENST00000433568 MYCP01106 439 aaPredicted RBP23.51■■□□□ 1.35
UBE2F-209ENST00000433568 PABPC4Q13310 644 aaKnown RBP eCLIP23.51■■□□□ 1.35
UBE2F-209ENST00000433568 GIMAP6Q6P9H5 292 aa23.51■■□□□ 1.35
UBE2F-209ENST00000433568 TMEM179Q6ZVK1 233 aa23.51■■□□□ 1.35
UBE2F-209ENST00000433568 KIAA1683Q9H0B3 1180 aa23.51■■□□□ 1.35
UBE2F-209ENST00000433568 OSBPL3Q9H4L5 887 aa23.51■■□□□ 1.35
UBE2F-209ENST00000433568 GABRQQ9UN88 632 aa23.51■■□□□ 1.35
UBE2F-209ENST00000433568 VCAM1P19320 739 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 ATP2B2Q01814 1243 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 ICA1Q05084 483 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 POTEEQ6S8J3 1075 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 ZNF589Q86UQ0 364 aaPredicted RBP23.5■■□□□ 1.35
UBE2F-209ENST00000433568 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.5■■□□□ 1.35
UBE2F-209ENST00000433568 NAPBQ9H115 298 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 TXNRD2Q9NNW7 524 aa23.5■■□□□ 1.35
UBE2F-209ENST00000433568 RASA1P20936 1047 aa23.49■■□□□ 1.35
UBE2F-209ENST00000433568 HOXA7P31268 230 aaPredicted RBP23.49■■□□□ 1.35
UBE2F-209ENST00000433568 SH3TC2Q8TF17 1288 aa23.49■■□□□ 1.35
UBE2F-209ENST00000433568 C12orf42Q96LP6 360 aa23.49■■□□□ 1.35
UBE2F-209ENST00000433568 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
UBE2F-209ENST00000433568 SRRDQ9UH36 339 aa23.49■■□□□ 1.35
UBE2F-209ENST00000433568 SDSP20132 328 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 FCGRTP55899 365 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 HERVK_113P62684 666 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 PRKCZQ05513 592 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 ARHGEF6Q15052 776 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 SPICE1Q8N0Z3 855 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 CCDC17Q96LX7 622 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 PAGR1Q9BTK6 254 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 NACAP1Q9BZK3 213 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 RPAP3Q9H6T3 665 aaPredicted RBP23.48■■□□□ 1.35
UBE2F-209ENST00000433568 MKNK2Q9HBH9 465 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 HELLSQ9NRZ9 838 aa23.48■■□□□ 1.35
UBE2F-209ENST00000433568 EEF2P13639 858 aaKnown RBP23.47■■□□□ 1.35
UBE2F-209ENST00000433568 USP14P54578 494 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 CTDSPL2Q05D32 466 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 FAM110CQ1W6H9 321 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 TACC3Q9Y6A5 838 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 MYPNQ86TC9 1320 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 ROBO3Q96MS0 1386 aa23.47■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L15C9J2P7 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L13C9JLJ4 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L11C9JVI0 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L18D6R9N7 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L22D6RA61 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L17D6RBQ6 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L19D6RCP7 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L20D6RJB6 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 GCLCP48506 637 aaPredicted RBP23.46■■□□□ 1.35
UBE2F-209ENST00000433568 PPARAQ07869 468 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 USP17L24Q0WX57 530 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 Q3C1V9 767 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 MCMDC2Q4G0Z9 681 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 SKAP1Q86WV1 359 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 RBPJLQ9UBG7 517 aa23.46■■□□□ 1.35
UBE2F-209ENST00000433568 MYH8P13535 1937 aa23.45■■□□□ 1.35
UBE2F-209ENST00000433568 TNPO2O14787 897 aaKnown RBP23.45■■□□□ 1.34
UBE2F-209ENST00000433568 GSPT1P15170 499 aaKnown RBP23.45■■□□□ 1.34
UBE2F-209ENST00000433568 SLC9C1Q4G0N8 1177 aa23.45■■□□□ 1.34
UBE2F-209ENST00000433568 FAM47AQ5JRC9 791 aa23.45■■□□□ 1.34
UBE2F-209ENST00000433568 CATSPERGQ6ZRH7 1159 aa23.45■■□□□ 1.34
UBE2F-209ENST00000433568 ARHGEF10LQ9HCE6 1279 aa23.45■■□□□ 1.34
UBE2F-209ENST00000433568 RAD21O60216 631 aa23.44■■□□□ 1.34
UBE2F-209ENST00000433568 SAMD1Q6SPF0 538 aaPredicted RBP23.44■■□□□ 1.34
UBE2F-209ENST00000433568 CWC27Q6UX04 472 aaKnown RBP23.44■■□□□ 1.34
UBE2F-209ENST00000433568 RAET1EQ8TD07 263 aa23.44■■□□□ 1.34
UBE2F-209ENST00000433568 TAOK2Q9UL54 1235 aa23.44■■□□□ 1.34
UBE2F-209ENST00000433568 CNMDO75829 334 aa23.43■■□□□ 1.34
UBE2F-209ENST00000433568 ARMC5Q96C12 935 aa23.43■■□□□ 1.34
UBE2F-209ENST00000433568 TANGO6Q9C0B7 1094 aa23.43■■□□□ 1.34
UBE2F-209ENST00000433568 KANSL2Q9H9L4 492 aa23.43■■□□□ 1.34
UBE2F-209ENST00000433568 TMX2Q9Y320 296 aa23.43■■□□□ 1.34
UBE2F-209ENST00000433568 CCDC171Q6TFL3 1326 aa23.42■■□□□ 1.34
UBE2F-209ENST00000433568 POTEFA5A3E0 1075 aa23.42■■□□□ 1.34
UBE2F-209ENST00000433568 GNRH1P01148 92 aa23.42■■□□□ 1.34
UBE2F-209ENST00000433568 HSPD1P10809 573 aaKnown RBP23.42■■□□□ 1.34
UBE2F-209ENST00000433568 HOXD10P28358 340 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms