RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TNNI2P48788 182 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 TMEM67Q5HYA8 995 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 SNAP47Q5SQN1 464 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 BNC2Q6ZN30 1099 aaPredicted RBP8.37□□□□□ -1.07
PTPN4-204ENST00000431283 CYB5D2Q8WUJ1 264 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 ALPK1Q96QP1 1244 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 SLAMF8Q9P0V8 285 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 KCNH3Q9ULD8 1083 aa8.37□□□□□ -1.07
PTPN4-204ENST00000431283 CILPO75339 1184 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 PF4P02776 101 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 GDNFP39905 211 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 MLANAQ16655 118 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 GATAD2BQ8WXI9 593 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 TMEM74Q96NL1 305 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 GZF1Q9H116 711 aaPredicted RBP8.36□□□□□ -1.07
PTPN4-204ENST00000431283 GPATCH2Q9NW75 528 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 CORINQ9Y5Q5 1042 aa8.36□□□□□ -1.07
PTPN4-204ENST00000431283 GLI1P08151 1106 aa8.35□□□□□ -1.07
PTPN4-204ENST00000431283 MLECQ14165 292 aa8.35□□□□□ -1.07
PTPN4-204ENST00000431283 CREG2Q8IUH2 290 aa8.35□□□□□ -1.07
PTPN4-204ENST00000431283 SYTL4Q96C24 671 aaPredicted RBP8.35□□□□□ -1.07
PTPN4-204ENST00000431283 FAM84AQ96KN4 292 aa8.35□□□□□ -1.07
PTPN4-204ENST00000431283 F13A1P00488 732 aa8.34□□□□□ -1.07
PTPN4-204ENST00000431283 ZNF124Q15973 351 aa8.34□□□□□ -1.07
PTPN4-204ENST00000431283 TTC6Q86TZ1 520 aa8.34□□□□□ -1.07
PTPN4-204ENST00000431283 DNAJB8Q8NHS0 232 aa8.34□□□□□ -1.07
PTPN4-204ENST00000431283 RSRP1Q9BUV0 290 aa8.34□□□□□ -1.07
PTPN4-204ENST00000431283 MINDY4BA8MYZ0 360 aa8.33□□□□□ -1.08
PTPN4-204ENST00000431283 TPP2P29144 1249 aaPredicted RBP8.33□□□□□ -1.08
PTPN4-204ENST00000431283 FAM160A1Q05DH4 1040 aa8.33□□□□□ -1.08
PTPN4-204ENST00000431283 FYB2Q5VWT5 728 aa8.33□□□□□ -1.08
PTPN4-204ENST00000431283 GOLM1Q8NBJ4 401 aa8.33□□□□□ -1.08
PTPN4-204ENST00000431283 LIN37Q96GY3 246 aaPredicted RBP8.33□□□□□ -1.08
PTPN4-204ENST00000431283 KLHL3Q9UH77 587 aa8.33□□□□□ -1.08
PTPN4-204ENST00000431283 FAM221AA4D161 298 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 ZNF503-AS2A6NEH8 195 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 UPK3BL1B0FP48 263 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 UPK3BL2E5RIL1 263 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 JAG1P78504 1218 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 TMEM201Q5SNT2 666 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 PHACTR4Q8IZ21 702 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 REV1Q9UBZ9 1251 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 DUSP13Q9UII6 198 aa8.32□□□□□ -1.08
PTPN4-204ENST00000431283 GRIN3BO60391 1043 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 LTKP29376 864 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 HK2P52789 917 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 TAGLNQ01995 201 aaKnown RBP8.31□□□□□ -1.08
PTPN4-204ENST00000431283 ZNF326Q5BKZ1 582 aaKnown RBP8.31□□□□□ -1.08
PTPN4-204ENST00000431283 SLFN12Q8IYM2 578 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 RHOVQ96L33 236 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 CCDC74BQ96LY2 380 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 PPP1R16BQ96T49 567 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 TMEM59LQ9UK28 342 aa8.31□□□□□ -1.08
PTPN4-204ENST00000431283 DBX1A6NMT0 343 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 HTR3BO95264 441 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 MPP2Q14168 576 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 CWF19L2Q2TBE0 894 aaKnown RBP8.3□□□□□ -1.08
PTPN4-204ENST00000431283 DTWD2Q8NBA8 298 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 ABHD4Q8TB40 342 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 RNF141Q8WVD5 230 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 Q96M66 194 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 KRTAP9-9Q9BYP9 154 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 KRTAP9-4Q9BYQ2 154 aa8.3□□□□□ -1.08
PTPN4-204ENST00000431283 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.3□□□□□ -1.08
PTPN4-204ENST00000431283 ESR1P03372 595 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 GBP1P32455 592 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 BHLHE22Q8NFJ8 381 aaPredicted RBP8.29□□□□□ -1.08
PTPN4-204ENST00000431283 PPP1R13LQ8WUF5 828 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 MYLIPQ8WY64 445 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 BCL2L13Q9BXK5 485 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 GPR62Q9BZJ7 368 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 ASCC2Q9H1I8 757 aaPredicted RBP8.29□□□□□ -1.08
PTPN4-204ENST00000431283 DUSP15Q9H1R2 295 aaPredicted RBP8.29□□□□□ -1.08
PTPN4-204ENST00000431283 C19orf73Q9NVV2 129 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 PRR36Q9H6K5 1346 aa8.29□□□□□ -1.08
PTPN4-204ENST00000431283 DNAJC25-GNG10A0A024R161 153 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 EGR3Q06889 387 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 CLEC16AQ2KHT3 1053 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 RALGPS1Q5JS13 557 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 REC114Q7Z4M0 266 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 ASPNQ9BXN1 380 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 KBTBD4Q9NVX7 518 aa8.28□□□□□ -1.08
PTPN4-204ENST00000431283 TLR3O15455 904 aaKnown RBP8.27□□□□□ -1.09
PTPN4-204ENST00000431283 RAP1GAPP47736 663 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 MESP2Q0VG99 397 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 PRR23BQ6ZRT6 265 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 FAM196AQ6ZSG2 479 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 TSPYL5Q86VY4 417 aaPredicted RBP8.27□□□□□ -1.09
PTPN4-204ENST00000431283 DHX38Q92620 1227 aaKnown RBP8.27□□□□□ -1.09
PTPN4-204ENST00000431283 KREMEN1Q96MU8 473 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 DIRC2Q96SL1 478 aa8.27□□□□□ -1.09
PTPN4-204ENST00000431283 SUPT16HQ9Y5B9 1047 aaKnown RBP8.27□□□□□ -1.09
PTPN4-204ENST00000431283 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
PTPN4-204ENST00000431283 CHURC1-FNTBB4DL54 471 aa8.26□□□□□ -1.09
PTPN4-204ENST00000431283 OXR1Q8N573 874 aa8.26□□□□□ -1.09
PTPN4-204ENST00000431283 BAHD1Q8TBE0 780 aaPredicted RBP8.26□□□□□ -1.09
PTPN4-204ENST00000431283 ADAMTS10Q9H324 1103 aa8.26□□□□□ -1.09
PTPN4-204ENST00000431283 NSUN3Q9H649 340 aaKnown RBP8.26□□□□□ -1.09
PTPN4-204ENST00000431283 POLR3KQ9Y2Y1 108 aaPredicted RBP8.26□□□□□ -1.09
PTPN4-204ENST00000431283 ROBO2Q9HCK4 1378 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms