RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 PIEZO1Q92508 2521 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 A0A0G2JLL6 359 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 SLC5A1P13866 664 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 ADORA1P30542 326 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 EMP3P54852 163 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 MRPS5P82675 430 aaKnown RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 CHAF1AQ13111 956 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 CAVIN4Q5BKX8 364 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 NOL9Q5SY16 702 aaKnown RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 PRRT2Q7Z6L0 340 aaPredicted RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 ALYREFQ86V81 257 aaKnown RBP10.53□□□□□ -0.72
HDAC1-202ENST00000428704 TRIB2Q92519 343 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 TEKT1Q969V4 418 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 C1orf115Q9H7X2 142 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 ZNF112Q9UJU3 913 aa10.53□□□□□ -0.72
HDAC1-202ENST00000428704 RPAP1Q9BWH6 1393 aaPredicted RBP10.52□□□□□ -0.72
HDAC1-202ENST00000428704 PHKA1P46020 1223 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 TFCP2Q12800 502 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 GRIN2CQ14957 1233 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 FAM110CQ1W6H9 321 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 BMP2KLQ5H9B9 411 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 FKBP1CQ5VVH2 108 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 VPS37DQ86XT2 251 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 SENP6Q9GZR1 1112 aaPredicted RBP10.52□□□□□ -0.73
HDAC1-202ENST00000428704 CEP126Q9P2H0 1117 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 MYH2Q9UKX2 1941 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 MAST2Q6P0Q8 1798 aa10.52□□□□□ -0.73
HDAC1-202ENST00000428704 MYO5AQ9Y4I1 1855 aaKnown RBP10.51□□□□□ -0.73
HDAC1-202ENST00000428704 EIF5BO60841 1220 aaKnown RBP10.51□□□□□ -0.73
HDAC1-202ENST00000428704 HDLBPQ00341 1268 aaKnown RBP10.51□□□□□ -0.73
HDAC1-202ENST00000428704 MAP3K21Q5TCX8 1036 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 CEP85Q6P2H3 762 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 SSH3Q8TE77 659 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 UPF2Q9HAU5 1272 aaKnown RBP10.51□□□□□ -0.73
HDAC1-202ENST00000428704 PICK1Q9NRD5 415 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 PNMA3Q9UL41 463 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 LHX6Q9UPM6 363 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 ZHX2Q9Y6X8 837 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 MGAMO43451 1857 aa10.51□□□□□ -0.73
HDAC1-202ENST00000428704 BDP1A6H8Y1 2624 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 A0A1B0GUL7 405 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 CYP2B6P20813 491 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 ANKRD45Q5TZF3 282 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 TBC1D22AQ8WUA7 517 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 FAM151AQ8WW52 585 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 ZDHHC15Q96MV8 337 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 GAS2L1Q99501 681 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-202ENST00000428704 LRFN3Q9BTN0 628 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 PRDM5Q9NQX1 630 aaPredicted RBP10.5□□□□□ -0.73
HDAC1-202ENST00000428704 GJD2Q9UKL4 321 aa10.5□□□□□ -0.73
HDAC1-202ENST00000428704 HMMRO75330 724 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 FRAT2O75474 233 aaPredicted RBP10.49□□□□□ -0.73
HDAC1-202ENST00000428704 RTP1P59025 263 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 TIMM10P62072 90 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 ATP8B2P98198 1209 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 RASGRF1Q13972 1273 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 SCYL3Q8IZE3 742 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 BADQ92934 168 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 TBC1D32Q96NH3 1257 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 AGTPBP1Q9UPW5 1226 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 ATP11BQ9Y2G3 1177 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 SALL1Q9NSC2 1324 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 DOCK2Q92608 1830 aa10.49□□□□□ -0.73
HDAC1-202ENST00000428704 TRIM75PA6NK02 468 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 SEMA3EO15041 775 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 ZKSCAN1P17029 563 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 PRDX5P30044 214 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 CCND3P30281 292 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 CACNB2Q08289 660 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 TCP10Q12799 353 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 TMEM31Q5JXX7 168 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 APOBEC3HQ6NTF7 200 aaKnown RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 POTEEQ6S8J3 1075 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 WDR66Q8TBY9 1149 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 XAGE2Q96GT9 111 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 RNPC3Q96LT9 517 aaKnown RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 NECAB3Q96P71 396 aaPredicted RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 LNPKQ9C0E8 428 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 SUGT1Q9Y2Z0 365 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 AFG3L2Q9Y4W6 797 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 PDS5AQ29RF7 1337 aaKnown RBP10.48□□□□□ -0.73
HDAC1-202ENST00000428704 CDK5RAP2Q96SN8 1893 aa10.48□□□□□ -0.73
HDAC1-202ENST00000428704 PTPRAP18433 802 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 DNAJB2P25686 324 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 GCLCP48506 637 aaPredicted RBP10.47□□□□□ -0.73
HDAC1-202ENST00000428704 DIXDC1Q155Q3 683 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 TRMT44Q8IYL2 757 aaKnown RBP10.47□□□□□ -0.73
HDAC1-202ENST00000428704 SOCS4Q8WXH5 440 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 NUDT12Q9BQG2 462 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 MRIQ9BWK5 157 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 ZNF576Q9H609 170 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 DENND2AQ9ULE3 1009 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 AKAP2Q9Y2D5 859 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 MAST3O60307 1309 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 RFX7Q2KHR2 1363 aa10.47□□□□□ -0.73
HDAC1-202ENST00000428704 FAM205CA6NFA0 338 aa10.46□□□□□ -0.73
HDAC1-202ENST00000428704 XRCC5P13010 732 aaKnown RBP10.46□□□□□ -0.73
HDAC1-202ENST00000428704 ARID4AP29374 1257 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms