RNA–Protein interactions for RNA: ENST00000428239.5

CDC7-203, Transcript of cell division cycle 7, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC7, Length 3,313 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7-203ENST00000428239 PSMA5P28066 241 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 PPATQ06203 517 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 IFIT1BQ5T764 474 aaKnown RBP8.25□□□□□ -1.09
CDC7-203ENST00000428239 BLOC1S2Q6QNY1 142 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 RASAL3Q86YV0 1011 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 MANSC4A6NHS7 340 aaPredicted RBP8.25□□□□□ -1.09
CDC7-203ENST00000428239 CCDC69A6NI79 296 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 SPDYE5A6NIY4 337 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 E7EWF7 191 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 CASTP20810 708 aaKnown RBP8.25□□□□□ -1.09
CDC7-203ENST00000428239 TAF1CQ15572 869 aaPredicted RBP8.25□□□□□ -1.09
CDC7-203ENST00000428239 PPP4R3BQ5MIZ7 849 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 ACER1Q8TDN7 264 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 CEP95Q96GE4 821 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 NEK1Q96PY6 1258 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 UPF3BQ9BZI7 483 aaKnown RBP8.25□□□□□ -1.09
CDC7-203ENST00000428239 GOPCQ9HD26 462 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 TSKSQ9UJT2 592 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 NEDD4P46934 1319 aa8.25□□□□□ -1.09
CDC7-203ENST00000428239 PLS1Q14651 629 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 WTAPQ15007 396 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 LDLRAD1Q5T700 205 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 RAB11FIP4Q86YS3 637 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 PAGR1Q9BTK6 254 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 MAST2Q6P0Q8 1798 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 PRC1O43663 620 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 TTLL1O95922 423 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 MCM5P33992 734 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 USP14P54578 494 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 PABPC4Q13310 644 aaKnown RBP eCLIP8.24□□□□□ -1.09
CDC7-203ENST00000428239 PPIL2Q13356 520 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 FASTKD5Q7L8L6 764 aaKnown RBP8.24□□□□□ -1.09
CDC7-203ENST00000428239 PIBF1Q8WXW3 757 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 RASSF10A6NK89 507 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 PHF20L1A8MW92 1017 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 FLOT1O75955 427 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 SLC10A3P09131 477 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 SLC1A4P43007 532 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 DGKZQ13574 1117 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 RRP1BQ14684 758 aaKnown RBP8.24□□□□□ -1.09
CDC7-203ENST00000428239 STAG1Q8WVM7 1258 aa8.24□□□□□ -1.09
CDC7-203ENST00000428239 ZBTB48P10074 688 aaPredicted RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 PCP11498 1178 aaKnown RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 CPA1P15085 419 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 GABPAQ06546 454 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 TATDN1Q6P1N9 297 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 CCDC144CPQ8IYA2 1237 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 CYP46A1Q9Y6A2 500 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 TNKSO95271 1327 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 FOXP2O15409 715 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 OSBPP22059 807 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 BACE1P56817 501 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 MAP3K11Q16584 847 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 SLFN13Q68D06 897 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 NEDD1Q8NHV4 660 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 ZIC5Q96T25 663 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 C22orf23Q9BZE7 217 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 ZSWIM5Q9P217 1185 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 BAZ2AQ9UIF9 1905 aaKnown RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 CXCL11O14625 94 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 MAP2K1Q02750 393 aaPredicted RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 CCDC178Q5BJE1 867 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 USP17L2Q6R6M4 530 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 CATIPQ7Z7H3 387 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 MICU3Q86XE3 530 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 KIFC2Q96AC6 838 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 ZSCAN10Q96SZ4 725 aaPredicted RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
CDC7-203ENST00000428239 VAT1LQ9HCJ6 419 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 ZNF112Q9UJU3 913 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 PNMA3Q9UL41 463 aa8.23□□□□□ -1.09
CDC7-203ENST00000428239 MYH7P12883 1935 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 SSC5DA1L4H1 1573 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 C19orf81C9J6K1 198 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 ORC4O43929 436 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 SEC24BO95487 1268 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 JAG1P78504 1218 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 TPRNQ4KMQ1 711 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 CCDC82Q8N4S0 544 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 MTMR4Q9NYA4 1195 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 ANAPC4Q9UJX5 808 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 SLC12A7Q9Y666 1083 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 TAF6LQ9Y6J9 622 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 PDHXO00330 501 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 HMGB1P09429 215 aaKnown RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 NOL9Q5SY16 702 aaKnown RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 FAM83BQ5T0W9 1011 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 RASEFQ8IZ41 740 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 CPXCR1Q8N123 301 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 CTCFLQ8NI51 663 aaPredicted RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 LARP6Q9BRS8 491 aaKnown RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 USP26Q9BXU7 913 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 RPAP3Q9H6T3 665 aaPredicted RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 GINM1Q9NU53 330 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 FRMPD2Q68DX3 1309 aaPredicted RBP8.22□□□□□ -1.09
CDC7-203ENST00000428239 DOCK2Q92608 1830 aa8.22□□□□□ -1.09
CDC7-203ENST00000428239 F5H6K3 240 aa8.21□□□□□ -1.09
CDC7-203ENST00000428239 TBC1D8O95759 1140 aa8.21□□□□□ -1.09
CDC7-203ENST00000428239 ZMYM6O95789 1325 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms