RNA–Protein interactions for RNA: ENST00000426248.7

PKP4-205, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 4,134 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-205ENST00000426248 KIAA0825Q8IV33 1275 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 MAPKAPK5Q8IW41 473 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 CCAR1Q8IX12 1150 aaKnown RBP18.13■□□□□ 0.49
PKP4-205ENST00000426248 CRACR2BQ8N4Y2 399 aaPredicted RBP18.13■□□□□ 0.49
PKP4-205ENST00000426248 KCNG1Q9UIX4 513 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 PSDA5PKW4 1024 aaPredicted RBP18.13■□□□□ 0.49
PKP4-205ENST00000426248 C21orf2O43822 256 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 ME3Q16798 604 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 TEX11Q8IYF3 940 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 PLCH1Q4KWH8 1693 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 PPIP5K2O43314 1243 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 LMOD1P29536 600 aaPredicted RBP18.13■□□□□ 0.49
PKP4-205ENST00000426248 MCTP2Q6DN12 878 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 CCDC150Q8NCX0 1101 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 TGFBRAP1Q8WUH2 860 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 MASTLQ96GX5 879 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 CCDC12Q8WUD4 166 aaPredicted RBP18.13■□□□□ 0.49
PKP4-205ENST00000426248 ESR2Q92731 530 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 CNKSR1Q969H4 720 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 MYL10Q9BUA6 226 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 TPCN1Q9ULQ1 816 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 FAN1Q9Y2M0 1017 aa18.13■□□□□ 0.49
PKP4-205ENST00000426248 PDE4BQ07343 736 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 CC2D1AQ6P1N0 951 aaPredicted RBP18.12■□□□□ 0.49
PKP4-205ENST00000426248 TM6SF1Q9BZW5 370 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 INCENPQ9NQS7 918 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 TTF2Q9UNY4 1162 aaKnown RBP18.12■□□□□ 0.49
PKP4-205ENST00000426248 EPB41L2O43491 1005 aaKnown RBP18.12■□□□□ 0.49
PKP4-205ENST00000426248 RHOXF2BP0C7M4 288 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 METAP2P50579 478 aaKnown RBP eCLIP18.12■□□□□ 0.499e-10■■□□□ 11.4
PKP4-205ENST00000426248 MECOMQ03112 1051 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 WTAPQ15007 396 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 TRIM22Q8IYM9 498 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 LEO1Q8WVC0 666 aaPredicted RBP18.12■□□□□ 0.49
PKP4-205ENST00000426248 RHOXF2Q9BQY4 288 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 CYP2D7A0A087X1C5 515 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 ARID4AP29374 1257 aaPredicted RBP18.12■□□□□ 0.49
PKP4-205ENST00000426248 RPAINQ86UA6 219 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 MRFAP1L1Q96HT8 127 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 KRT23Q9C075 422 aa18.12■□□□□ 0.49
PKP4-205ENST00000426248 A0A0G2JLW4 131 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 BCS1LQ9Y276 419 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 ERLIN2O94905 339 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 PSEN1P49768 467 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 CCZ1BP86790 482 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 CCZ1P86791 482 aaPredicted RBP18.11■□□□□ 0.49
PKP4-205ENST00000426248 KARSQ15046 597 aaKnown RBP18.11■□□□□ 0.49
PKP4-205ENST00000426248 SAFBQ15424 915 aaKnown RBP eCLIP18.11■□□□□ 0.49
PKP4-205ENST00000426248 RBM26Q5T8P6 1007 aaKnown RBP18.11■□□□□ 0.49
PKP4-205ENST00000426248 WWC2Q6AWC2 1192 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 GBP6Q6ZN66 633 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 DOT1LQ8TEK3 1739 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 LONRF2Q1L5Z9 754 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 NBPF11Q86T75 865 aa18.11■□□□□ 0.49
PKP4-205ENST00000426248 GPHNQ9NQX3 736 aaPredicted RBP18.11■□□□□ 0.49
PKP4-205ENST00000426248 GOLGA8FQ08AF8 430 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 GOLGA8DPQ0D2H9 430 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 STRBPQ96SI9 672 aaKnown RBP18.1■□□□□ 0.49
PKP4-205ENST00000426248 PARD6BQ9BYG5 372 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 XPO4Q9C0E2 1151 aaKnown RBP18.1■□□□□ 0.49
PKP4-205ENST00000426248 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 TMOD2Q9NZR1 351 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 EFCAB8A8MWE9 144 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 ZBTB43O43298 467 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 SASH3O75995 380 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 GOLGA1Q92805 767 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 CNNM2Q9H8M5 875 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
PKP4-205ENST00000426248 FGFR2P21802 821 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 IKQ13123 557 aaPredicted RBP18.1■□□□□ 0.49
PKP4-205ENST00000426248 R3HDM1Q15032 1099 aaKnown RBP18.1■□□□□ 0.49
PKP4-205ENST00000426248 ABCA3Q99758 1704 aa18.1■□□□□ 0.49
PKP4-205ENST00000426248 ZSCAN12O43309 604 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 MMS22LQ6ZRQ5 1243 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 VGLL2Q8N8G2 317 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 CAVIN2O95810 425 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 FSIP1Q8NA03 581 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 JAK2O60674 1132 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 CALRP27797 417 aaKnown RBP18.09■□□□□ 0.49
PKP4-205ENST00000426248 LRCH2Q5VUJ6 765 aa18.09■□□□□ 0.49
PKP4-205ENST00000426248 E4F1Q66K89 784 aaPredicted RBP18.09■□□□□ 0.49
PKP4-205ENST00000426248 TBC1D8O95759 1140 aa18.08■□□□□ 0.49
PKP4-205ENST00000426248 TCP10Q12799 353 aa18.08■□□□□ 0.49
PKP4-205ENST00000426248 OGFOD1Q8N543 542 aa18.08■□□□□ 0.49
PKP4-205ENST00000426248 C8orf76Q96K31 380 aa18.08■□□□□ 0.49
PKP4-205ENST00000426248 AKNAD1Q5T1N1 836 aa18.08■□□□□ 0.48
PKP4-205ENST00000426248 CFAP45Q9UL16 551 aa18.08■□□□□ 0.48
PKP4-205ENST00000426248 FAM47AQ5JRC9 791 aa18.08■□□□□ 0.48
PKP4-205ENST00000426248 GPR161Q8N6U8 529 aaKnown RBP18.08■□□□□ 0.48
PKP4-205ENST00000426248 SLC26A6Q9BXS9 759 aa18.08■□□□□ 0.48
PKP4-205ENST00000426248 SEMA3EO15041 775 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 CDKL5O76039 1030 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 TSPY3P0CV98 308 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 TSPY8P0CW00 308 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 PPARAQ07869 468 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 IFIT1BQ5T764 474 aaKnown RBP18.07■□□□□ 0.48
PKP4-205ENST00000426248 SLC51AQ86UW1 340 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 TBC1D16Q8TBP0 767 aa18.07■□□□□ 0.48
PKP4-205ENST00000426248 JDP2Q8WYK2 163 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms