RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 IL16Q14005 1332 aa6.76□□□□□ -1.33
VPS8-205ENST00000424721 SHTN1A0MZ66 631 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 FIGNL2A6NMB9 653 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 TMEM229AB2RXF0 380 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 PPP1R12BO60237 982 aaPredicted RBP6.75□□□□□ -1.33
VPS8-205ENST00000424721 TM4SF4P48230 202 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 CLN3Q13286 438 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 IFIT5Q13325 482 aaKnown RBP6.75□□□□□ -1.33
VPS8-205ENST00000424721 DLGAP5Q15398 846 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 NOM1Q5C9Z4 860 aaKnown RBP6.75□□□□□ -1.33
VPS8-205ENST00000424721 WDR63Q8IWG1 891 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 GMLQ99445 158 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 PLA2G12BQ9BX93 195 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 TRPM7Q96QT4 1865 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 ZNF804BA4D1E1 1349 aa6.75□□□□□ -1.33
VPS8-205ENST00000424721 ANKRD36CQ5JPF3 1778 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 COL4A5P29400 1685 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 RTL9Q8NET4 1388 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 MED23Q9ULK4 1368 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 NEURL1BA8MQ27 555 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 UBE2Q2LH0YL09 131 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 MAN1A2O60476 641 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 WDHD1O75717 1129 aaPredicted RBP6.74□□□□□ -1.33
VPS8-205ENST00000424721 DKK1O94907 266 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 IL2RAP01589 272 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 CSF1RP07333 972 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 ITGA6P23229 1130 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 FKBP5Q13451 457 aaPredicted RBP6.74□□□□□ -1.33
VPS8-205ENST00000424721 GCKRQ14397 625 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 CCDC57Q2TAC2 916 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 TAF7LQ5H9L4 462 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 FOXD4L5Q5VV16 416 aaPredicted RBP6.74□□□□□ -1.33
VPS8-205ENST00000424721 ZNF804AQ7Z570 1209 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.74□□□□□ -1.33
VPS8-205ENST00000424721 LINS1Q8NG48 757 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 DNAAF4Q8WXU2 420 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 JARID2Q92833 1246 aaPredicted RBP6.74□□□□□ -1.33
VPS8-205ENST00000424721 ESYT1Q9BSJ8 1104 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 GREM2Q9H772 168 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 DNMT3LQ9UJW3 386 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 PPP2R3BQ9Y5P8 575 aa6.74□□□□□ -1.33
VPS8-205ENST00000424721 MANSC4A6NHS7 340 aaPredicted RBP6.73□□□□□ -1.33
VPS8-205ENST00000424721 SFI1A8K8P3 1242 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 WNT10BO00744 389 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 ANP32CO43423 234 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 FKTNO75072 461 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 EGFRP00533 1210 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 IGKV5-2P06315 115 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 FKBP1AP62942 108 aaKnown RBP6.73□□□□□ -1.33
VPS8-205ENST00000424721 TLR1Q15399 786 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 NBPF9Q3BBW0 867 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 DACT2Q5SW24 774 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 INTS3Q68E01 1043 aaKnown RBP6.73□□□□□ -1.33
VPS8-205ENST00000424721 UBE3BQ7Z3V4 1068 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 SLC51AQ86UW1 340 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 RASAL3Q86YV0 1011 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 CLP1Q92989 425 aaKnown RBP6.73□□□□□ -1.33
VPS8-205ENST00000424721 ZIC5Q96T25 663 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 C9orf78Q9NZ63 289 aaPredicted RBP6.73□□□□□ -1.33
VPS8-205ENST00000424721 ZNF609O15014 1411 aa6.73□□□□□ -1.33
VPS8-205ENST00000424721 PATL2C9JE40 543 aaKnown RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 GPC1P35052 558 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 ZEB1P37275 1124 aaPredicted RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 IREB2P48200 963 aaKnown RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 TNNI2P48788 182 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 RNF144AP50876 292 aaPredicted RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 RBM5P52756 815 aaKnown RBP eCLIP6.72□□□□□ -1.33
VPS8-205ENST00000424721 CHRNDQ07001 517 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 TNFAIP1Q13829 316 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 CWF19L2Q2TBE0 894 aaKnown RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 TMCO4Q5TGY1 634 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 DLK2Q6UY11 383 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 LDHAL6AQ6ZMR3 332 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 C15orf52Q6ZUT6 534 aaKnown RBP6.72□□□□□ -1.33
VPS8-205ENST00000424721 TSPYL6Q8N831 410 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 RNF217Q8TC41 542 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 HOOK2Q96ED9 719 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 HINFPQ9BQA5 517 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 DEFB129Q9H1M3 183 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 CD209Q9NNX6 404 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 CNNM1Q9NRU3 951 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 SERTAD1Q9UHV2 236 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 CHMP3Q9Y3E7 222 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 LTBP1Q14766 1721 aa6.72□□□□□ -1.33
VPS8-205ENST00000424721 GPR25O00155 361 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 SASH1O94885 1247 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 TBC1D8O95759 1140 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 ZBTB48P10074 688 aaPredicted RBP6.71□□□□□ -1.34
VPS8-205ENST00000424721 SMTNP53814 917 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 PTPN12Q05209 780 aaKnown RBP6.71□□□□□ -1.34
VPS8-205ENST00000424721 LDLRAD1Q5T700 205 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 FBXO46Q6PJ61 603 aaPredicted RBP6.71□□□□□ -1.34
VPS8-205ENST00000424721 PRICKLE2Q7Z3G6 844 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 VPS37DQ86XT2 251 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 KIAA0825Q8IV33 1275 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 TSEN2Q8NCE0 465 aaKnown RBP6.71□□□□□ -1.34
VPS8-205ENST00000424721 TSR2Q969E8 191 aaKnown RBP6.71□□□□□ -1.34
VPS8-205ENST00000424721 GCC1Q96CN9 775 aa6.71□□□□□ -1.34
VPS8-205ENST00000424721 CFHR5Q9BXR6 569 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms