RNA–Protein interactions for RNA: ENST00000424424.1

PRNP-202, Transcript of prion protein, humanhuman

TSL 1 (best)

Gene PRNP, Length 806 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-202ENST00000424424 HIP1O00291 1037 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 SLC3A2P08195 630 aaKnown RBP22.3■■□□□ 1.16
PRNP-202ENST00000424424 SDSP20132 328 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 PDE4AP27815 886 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 GUCY1A2P33402 732 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 CCDC129Q6ZRS4 1044 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 FAM227BQ96M60 508 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 KIAA1683Q9H0B3 1180 aa22.3■■□□□ 1.16
PRNP-202ENST00000424424 SMIM22K7EJ46 135 aa22.29■■□□□ 1.16
PRNP-202ENST00000424424 AKR1B1P15121 316 aa22.29■■□□□ 1.16
PRNP-202ENST00000424424 HOXA7P31268 230 aaPredicted RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 MFAP1P55081 439 aaKnown RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 IRX3P78415 501 aaPredicted RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 LACTBP83111 547 aaPredicted RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 NMIQ13287 307 aaPredicted RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 ZYXQ15942 572 aaKnown RBP22.29■■□□□ 1.16
PRNP-202ENST00000424424 ROBO3Q96MS0 1386 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 A0A0D9SFI3 127 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 GNRH1P01148 92 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 BCRP11274 1271 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 STK11IPQ8N1F8 1099 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 ACER1Q8TDN7 264 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 C12orf42Q96LP6 360 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 ASCC2Q9H1I8 757 aaPredicted RBP22.28■■□□□ 1.16
PRNP-202ENST00000424424 ARHGEF10LQ9HCE6 1279 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 DIAPH3Q9NSV4 1193 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 EMILIN3Q9NT22 766 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 MGAMO43451 1857 aa22.28■■□□□ 1.16
PRNP-202ENST00000424424 CCDC85CA6NKD9 419 aa22.27■■□□□ 1.16
PRNP-202ENST00000424424 GCLCP48506 637 aaPredicted RBP22.27■■□□□ 1.16
PRNP-202ENST00000424424 PDE4BQ07343 736 aa22.27■■□□□ 1.16
PRNP-202ENST00000424424 ZNF444Q8N0Y2 327 aaPredicted RBP22.27■■□□□ 1.16
PRNP-202ENST00000424424 SH2D4AQ9H788 454 aa22.27■■□□□ 1.16
PRNP-202ENST00000424424 NEFLP07196 543 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 RGS19P49795 217 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 ICA1Q05084 483 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 PPARAQ07869 468 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 TTC22Q5TAA0 569 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 KANSL2Q9H9L4 492 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 PTPN22Q9Y2R2 807 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 CCDC171Q6TFL3 1326 aa22.26■■□□□ 1.15
PRNP-202ENST00000424424 FMNL1O95466 1100 aaPredicted RBP22.25■■□□□ 1.15
PRNP-202ENST00000424424 HOXD10P28358 340 aa22.25■■□□□ 1.15
PRNP-202ENST00000424424 PSMC4P43686 418 aa22.25■■□□□ 1.15
PRNP-202ENST00000424424 CENPQQ7L2Z9 268 aaPredicted RBP22.25■■□□□ 1.15
PRNP-202ENST00000424424 ANKRD13CQ8N6S4 541 aa22.25■■□□□ 1.15
PRNP-202ENST00000424424 HPS5Q9UPZ3 1129 aa22.25■■□□□ 1.15
PRNP-202ENST00000424424 ZSWIM8A7E2V4 1837 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L15C9J2P7 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L13C9JLJ4 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L11C9JVI0 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L18D6R9N7 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L22D6RA61 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L17D6RBQ6 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L19D6RCP7 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L20D6RJB6 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 RASA1P20936 1047 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 FCGRTP55899 365 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 USP17L24Q0WX57 530 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 ALX1Q15699 326 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 FAM110CQ1W6H9 321 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 VPS53Q5VIR6 699 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 CWC27Q6UX04 472 aaKnown RBP22.24■■□□□ 1.15
PRNP-202ENST00000424424 ARHGAP39Q9C0H5 1083 aa22.24■■□□□ 1.15
PRNP-202ENST00000424424 A0A1W2PRG0 241 aa22.23■■□□□ 1.15
PRNP-202ENST00000424424 ECM2O94769 699 aaPredicted RBP22.23■■□□□ 1.15
PRNP-202ENST00000424424 PRMT2P55345 433 aa22.23■■□□□ 1.15
PRNP-202ENST00000424424 ATP2B2Q01814 1243 aa22.23■■□□□ 1.15
PRNP-202ENST00000424424 GTF3C2Q8WUA4 911 aaPredicted RBP22.23■■□□□ 1.15
PRNP-202ENST00000424424 P2RX7Q99572 595 aaKnown RBP22.23■■□□□ 1.15
PRNP-202ENST00000424424 TMX2Q9Y320 296 aa22.23■■□□□ 1.15
PRNP-202ENST00000424424 GREB1LQ9C091 1923 aaPredicted RBP22.22■■□□□ 1.15
PRNP-202ENST00000424424 FOXP2O15409 715 aa22.22■■□□□ 1.15
PRNP-202ENST00000424424 HSPD1P10809 573 aaKnown RBP22.22■■□□□ 1.15
PRNP-202ENST00000424424 VCAM1P19320 739 aa22.22■■□□□ 1.15
PRNP-202ENST00000424424 HERVK_113P62684 666 aa22.22■■□□□ 1.15
PRNP-202ENST00000424424 CAP1Q01518 475 aa22.22■■□□□ 1.15
PRNP-202ENST00000424424 ZNF589Q86UQ0 364 aaPredicted RBP22.22■■□□□ 1.15
PRNP-202ENST00000424424 PRDM1O75626 825 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 FGAP02671 866 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 CENPBP07199 599 aaPredicted RBP22.21■■□□□ 1.15
PRNP-202ENST00000424424 EEF2P13639 858 aaKnown RBP22.21■■□□□ 1.15
PRNP-202ENST00000424424 GSPT1P15170 499 aaKnown RBP22.21■■□□□ 1.15
PRNP-202ENST00000424424 CATSPERGQ6ZRH7 1159 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 CLEC10AQ8IUN9 316 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 LPAR1Q92633 364 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 TRIM47Q96LD4 638 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 RPAP3Q9H6T3 665 aaPredicted RBP22.21■■□□□ 1.15
PRNP-202ENST00000424424 MYH4Q9Y623 1939 aa22.21■■□□□ 1.15
PRNP-202ENST00000424424 TSPY3P0CV98 308 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 TSPY8P0CW00 308 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 SIAH1Q8IUQ4 282 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 CCDC136Q96JN2 1154 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 VCPKMTQ9H867 229 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 GOPCQ9HD26 462 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 ANAPC4Q9UJX5 808 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 ZMYM6O95789 1325 aa22.2■■□□□ 1.14
PRNP-202ENST00000424424 TNPO2O14787 897 aaKnown RBP22.19■■□□□ 1.14
PRNP-202ENST00000424424 MLLT1Q03111 559 aaPredicted RBP22.19■■□□□ 1.14
PRNP-202ENST00000424424 CTDSPL2Q05D32 466 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms