RNA–Protein interactions for RNA: ENST00000421378.2

LINC00271-201, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best) BASIC

Gene LINC00271, Length 1,580 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-201ENST00000421378 HSPA6P17066 643 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 PSMA5P28066 241 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 MCM5P33992 734 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 PAXIP1Q6ZW49 1069 aaPredicted RBP20.67■□□□□ 0.9
LINC00271-201ENST00000421378 CYB5R4Q7L1T6 521 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 ZKSCAN3Q9BRR0 538 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 UBAC1Q9BSL1 405 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 IL17RBQ9NRM6 502 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 TCP11L1Q9NUJ3 509 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 MTMR4Q9NYA4 1195 aa20.67■□□□□ 0.9
LINC00271-201ENST00000421378 RBM25P49756 843 aaKnown RBP20.66■□□□□ 0.9
LINC00271-201ENST00000421378 PPIL2Q13356 520 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 PPP4R3BQ5MIZ7 849 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 RASAL3Q86YV0 1011 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 ZNF280CQ8ND82 737 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 WNK4Q96J92 1243 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 STX8Q9UNK0 236 aa20.66■□□□□ 0.9
LINC00271-201ENST00000421378 IRF6O14896 467 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 TTLL1O95922 423 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 ZBTB48P10074 688 aaPredicted RBP20.65■□□□□ 0.9
LINC00271-201ENST00000421378 CASTP20810 708 aaKnown RBP20.65■□□□□ 0.9
LINC00271-201ENST00000421378 HTRA3P83110 453 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 ATP2B2Q01814 1243 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 COL9A3Q14050 684 aaPredicted RBP20.65■□□□□ 0.9
LINC00271-201ENST00000421378 SART3Q15020 963 aaKnown RBP20.65■□□□□ 0.9
LINC00271-201ENST00000421378 DEFB115Q30KQ5 88 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 BLOC1S2Q6QNY1 142 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 CHST3Q7LGC8 479 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 CCDC102AQ96A19 550 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 ZSCAN10Q96SZ4 725 aaPredicted RBP20.65■□□□□ 0.9
LINC00271-201ENST00000421378 WDR18Q9BV38 432 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 ARHGEF10LQ9HCE6 1279 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 AFG3L2Q9Y4W6 797 aa20.65■□□□□ 0.9
LINC00271-201ENST00000421378 TRIM75PA6NK02 468 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 TNKSO95271 1327 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 SLC10A3P09131 477 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 EEF2P13639 858 aaKnown RBP20.64■□□□□ 0.9
LINC00271-201ENST00000421378 GJA5P36382 358 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 ANTXR2P58335 489 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 SPP2Q13103 211 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 CCDC178Q5BJE1 867 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 SPRYD7Q5W111 196 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 DHX32Q7L7V1 743 aaKnown RBP20.64■□□□□ 0.9
LINC00271-201ENST00000421378 IL17RAQ96F46 866 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 TBC1D32Q96NH3 1257 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 FEZ1Q99689 392 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 NYAP2Q9P242 653 aa20.64■□□□□ 0.9
LINC00271-201ENST00000421378 ERICH2A1L162 156 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 PRC1O43663 620 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
LINC00271-201ENST00000421378 CYP4F22Q6NT55 531 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 TM6SF1Q9BZW5 370 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 SH2D4AQ9H788 454 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 WDR19Q8NEZ3 1342 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 USP17L10C9JJH3 530 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 ECE1P42892 770 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 GRM1Q13255 1194 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 MTMR2Q13614 643 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 DGKHQ86XP1 1220 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 SIAH1Q8IUQ4 282 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 ENAHQ8N8S7 591 aaPredicted RBP20.63■□□□□ 0.89
LINC00271-201ENST00000421378 ACER1Q8TDN7 264 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 TTC14Q96N46 770 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 ZSWIM6Q9HCJ5 1215 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 CLIP2Q9UDT6 1046 aa20.63■□□□□ 0.89
LINC00271-201ENST00000421378 MYH4Q9Y623 1939 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 A0A1W2PRG0 241 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 FAM155AB1AL88 458 aaPredicted RBP20.62■□□□□ 0.89
LINC00271-201ENST00000421378 IFIT3O14879 490 aaKnown RBP20.62■□□□□ 0.89
LINC00271-201ENST00000421378 CPA1P15085 419 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 NOVP48745 357 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 BACE1P56817 501 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 RUFY3Q7L099 469 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 TMEM87BQ96K49 555 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 MTA3Q9BTC8 594 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 UPF3BQ9BZI7 483 aaKnown RBP20.62■□□□□ 0.89
LINC00271-201ENST00000421378 KCNH4Q9UQ05 1017 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 CYP46A1Q9Y6A2 500 aa20.62■□□□□ 0.89
LINC00271-201ENST00000421378 PTPRFP10586 1907 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 CXCL11O14625 94 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 RPS6KB1P23443 525 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 SNAPC2Q13487 334 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 TMEM67Q5HYA8 995 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 RCSD1Q6JBY9 416 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 CAPNS2Q96L46 248 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 TCEANC2Q96MN5 208 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 KIAA1683Q9H0B3 1180 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 TMX2Q9Y320 296 aa20.61■□□□□ 0.89
LINC00271-201ENST00000421378 EXOSC10Q01780 885 aaKnown RBP20.6■□□□□ 0.89
LINC00271-201ENST00000421378 SEC23AQ15436 765 aa20.6■□□□□ 0.89
LINC00271-201ENST00000421378 ZYXQ15942 572 aaKnown RBP20.6■□□□□ 0.89
LINC00271-201ENST00000421378 IFIT1BQ5T764 474 aaKnown RBP20.6■□□□□ 0.89
LINC00271-201ENST00000421378 LRRC47Q8N1G4 583 aaKnown RBP20.6■□□□□ 0.89
LINC00271-201ENST00000421378 MKL1Q969V6 931 aa20.6■□□□□ 0.89
LINC00271-201ENST00000421378 LRRC2Q9BYS8 371 aa20.6■□□□□ 0.89
LINC00271-201ENST00000421378 SYNPO2Q9UMS6 1093 aa20.6■□□□□ 0.89
LINC00271-201ENST00000421378 A0A0G2JLL6 359 aaPredicted RBP20.59■□□□□ 0.89
LINC00271-201ENST00000421378 C19orf81C9J6K1 198 aa20.59■□□□□ 0.89
LINC00271-201ENST00000421378 TOP1P11387 765 aaKnown RBP20.59■□□□□ 0.89
LINC00271-201ENST00000421378 GTF2A2P52657 109 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms