RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 USP17L2Q6R6M4 530 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 TMEM179Q6ZVK1 233 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 C16orf86Q6ZW13 317 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 PRRT2Q7Z6L0 340 aaPredicted RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 ANKRD23Q86SG2 305 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 FAM43AQ8N2R8 423 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 SMCR8Q8TEV9 937 aaPredicted RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 WDR18Q9BV38 432 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 SH2D4AQ9H788 454 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 CTNNA3Q9UI47 895 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 PNMA3Q9UL41 463 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 ISY1Q9ULR0 285 aaKnown RBP8.18□□□□□ -1.1
NCL-203ENST00000417652 CASP8AP2Q9UKL3 1982 aa8.18□□□□□ -1.1
NCL-203ENST00000417652 DOCK1Q14185 1865 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 TSPY2A6NKD2 308 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 GPR25O00155 361 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 RANBP6O60518 1105 aaKnown RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 PRDM1O75626 825 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 FGAP02671 866 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 AKR1B1P15121 316 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 CHMLP26374 656 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 HAND2P61296 217 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 JAG1P78504 1218 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 EVX2Q03828 476 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 ICA1Q05084 483 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 GABPAQ06546 454 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 CRHR2Q13324 411 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 ALX1Q15699 326 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 SHROOM1Q2M3G4 852 aaPredicted RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 VPS53Q5VIR6 699 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 ZNF589Q86UQ0 364 aaPredicted RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 CCAR1Q8IX12 1150 aaKnown RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 PROCA1Q8NCQ7 364 aaPredicted RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 PARK7Q99497 189 aaKnown RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 KANSL2Q9H9L4 492 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 EPB41L4AQ9HCS5 686 aaPredicted RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 ZCCHC17Q9NP64 241 aaKnown RBP8.17□□□□□ -1.1
NCL-203ENST00000417652 MYH8P13535 1937 aa8.17□□□□□ -1.1
NCL-203ENST00000417652 SMIM22K7EJ46 135 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 TFAP4Q01664 338 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 SP3Q02447 781 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 IMMTQ16891 758 aaKnown RBP8.16□□□□□ -1.1
NCL-203ENST00000417652 PPP4R3BQ5MIZ7 849 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 COL13A1Q5TAT6 717 aaPredicted RBP8.16□□□□□ -1.1
NCL-203ENST00000417652 MFSD6Q6ZSS7 791 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 SKAP1Q86WV1 359 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 TNS4Q8IZW8 715 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 ACER1Q8TDN7 264 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 ZNF296Q8WUU4 475 aaPredicted RBP8.16□□□□□ -1.1
NCL-203ENST00000417652 ERO1AQ96HE7 468 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 ATAD5Q96QE3 1844 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 RNF41Q9H4P4 317 aaPredicted RBP8.16□□□□□ -1.1
NCL-203ENST00000417652 CWC22Q9HCG8 908 aaKnown RBP8.16□□□□□ -1.1
NCL-203ENST00000417652 GOPCQ9HD26 462 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 CLIP2Q9UDT6 1046 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 CPA4Q9UI42 421 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 AGTPBP1Q9UPW5 1226 aa8.16□□□□□ -1.1
NCL-203ENST00000417652 RAD50Q92878 1312 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L15C9J2P7 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L13C9JLJ4 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L11C9JVI0 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L18D6R9N7 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L22D6RA61 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L17D6RBQ6 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L19D6RCP7 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 USP17L20D6RJB6 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 TLR2O60603 784 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 CYP2C8P10632 490 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 EEF2P13639 858 aaKnown RBP8.15□□□□□ -1.1
NCL-203ENST00000417652 RASA1P20936 1047 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 FXR2P51116 673 aaKnown RBP eCLIP8.15□□□□□ -1.11e-26■■□□□ 13.8
NCL-203ENST00000417652 USP17L24Q0WX57 530 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 TRDNQ13061 729 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 DGKZQ13574 1117 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 BMP2KLQ5H9B9 411 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 SH3D19Q5HYK7 790 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 FAM47AQ5JRC9 791 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 TREML2Q5T2D2 321 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 GPAT2Q6NUI2 795 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 DSCC1Q9BVC3 393 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 TANGO6Q9C0B7 1094 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 KIAA1683Q9H0B3 1180 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 R3HDMLQ9H3Y0 253 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 SLC45A1Q9Y2W3 748 aa8.15□□□□□ -1.1
NCL-203ENST00000417652 CTDP1Q9Y5B0 961 aaPredicted RBP8.15□□□□□ -1.1
NCL-203ENST00000417652 THSD7BQ9C0I4 1608 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 PITPNM1O00562 1244 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 CDC45O75419 566 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
NCL-203ENST00000417652 HOXD10P28358 340 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 GUCY1A2P33402 732 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 GCLCP48506 637 aaPredicted RBP8.14□□□□□ -1.11
NCL-203ENST00000417652 MOGSQ13724 837 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 AKNAD1Q5T1N1 836 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 CTU1Q7Z7A3 348 aaKnown RBP8.14□□□□□ -1.11
NCL-203ENST00000417652 CLEC10AQ8IUN9 316 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 SPICE1Q8N0Z3 855 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 CD99L2Q8TCZ2 262 aa8.14□□□□□ -1.11
NCL-203ENST00000417652 ESR2Q92731 530 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms