RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 SENP2Q9HC62 589 aa11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 NCOA5Q9HCD5 579 aaKnown RBP11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 CREBZFQ9NS37 354 aa11.87□□□□□ -0.51
DEPDC4-203ENST00000416321 PTPDC1A2A3K4 754 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 NMT2O60551 498 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 DDNO94850 711 aaPredicted RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 RXRAP19793 462 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 KIF5BP33176 963 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 SHMT1P34896 483 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 DDIT3P35638 169 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 ST3GAL1Q11201 340 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 CERKLQ49MI3 558 aaPredicted RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 SH3BP5LQ7L8J4 393 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 APOBEC3FQ8IUX4 373 aaKnown RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 CTCFLQ8NI51 663 aaPredicted RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 DDX11Q96FC9 970 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 CABP5Q9NP86 173 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 HPS5Q9UPZ3 1129 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 PLIN4Q96Q06 1357 aa11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 WDR33Q9C0J8 1336 aaKnown RBP11.86□□□□□ -0.51
DEPDC4-203ENST00000416321 CNTNAP1P78357 1384 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 TOP1P11387 765 aaKnown RBP11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 AKR1B1P15121 316 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 AKAP17AQ02040 695 aaKnown RBP11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 RASA3Q14644 834 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 LARP1BQ659C4 914 aaKnown RBP11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 TRIM22Q8IYM9 498 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 PNMA1Q8ND90 353 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 NSUN7Q8NE18 718 aaKnown RBP11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 ANKS1AQ92625 1134 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 HOOK2Q96ED9 719 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 TMEM39BQ9GZU3 492 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 ADARB2Q9NS39 739 aaKnown RBP11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 HACL1Q9UJ83 578 aa11.85□□□□□ -0.51
DEPDC4-203ENST00000416321 NID2Q14112 1375 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 VPS37CA5D8V6 355 aaPredicted RBP11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 C19orf67A6NJJ6 358 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 FAM196BA6NMK8 535 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 H3BQV1 296 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 STX6O43752 255 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 JAK2O60674 1132 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 EGFRP00533 1210 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 EPS15P42566 896 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 ATP2B2Q01814 1243 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 RAB3GAP1Q15042 981 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 ABCB5Q2M3G0 1257 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 IFFO2Q5TF58 517 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 ANGEL2Q5VTE6 544 aaKnown RBP11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 TMEM179Q6ZVK1 233 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 FANCBQ8NB91 859 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 WASF1Q92558 559 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 CEP95Q96GE4 821 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 GBP4Q96PP9 640 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 IL17RBQ9NRM6 502 aa11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 ORC3Q9UBD5 711 aaPredicted RBP11.84□□□□□ -0.51
DEPDC4-203ENST00000416321 SIPA1L1O43166 1804 aa11.83□□□□□ -0.51
DEPDC4-203ENST00000416321 TTLL1O95922 423 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 SYT1P21579 422 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 ADD1P35611 737 aaKnown RBP11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 GNAQP50148 359 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 SSRP1Q08945 709 aaKnown RBP11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 RCSD1Q6JBY9 416 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 TATDN1Q6P1N9 297 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 METTL16Q86W50 562 aaKnown RBP11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 TRPM4Q8TD43 1214 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 TMEM47Q9BQJ4 181 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 SLC26A6Q9BXS9 759 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 DNAJC18Q9H819 358 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 KANSL2Q9H9L4 492 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 GGA3Q9NZ52 723 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 MTMR7Q9Y216 660 aa11.83□□□□□ -0.52
DEPDC4-203ENST00000416321 IQCA1LA6NCM1 817 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 TBC1D12O60347 775 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 GDF11O95390 407 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 CTDNEP1O95476 244 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 CDC27P30260 824 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 TROAPQ12815 778 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 TRIM29Q14134 588 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 DCAF15Q66K64 600 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 DCPSQ96C86 337 aaKnown RBP11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 MAP3K14Q99558 947 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 DEFB129Q9H1M3 183 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 MTMR4Q9NYA4 1195 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 CLIP2Q9UDT6 1046 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 ATP6V1DQ9Y5K8 247 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 PPP2R3BQ9Y5P8 575 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 STK36Q9NRP7 1315 aa11.82□□□□□ -0.52
DEPDC4-203ENST00000416321 IGKV6D-41A0A0C4DH26 115 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 GLTPD2A6NH11 291 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 GOLGA6L22H0YM25 854 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 BRD1O95696 1058 aa11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 PARP1P09874 1014 aaKnown RBP11.81□□□□□ -0.52
DEPDC4-203ENST00000416321 ZSCAN22P10073 491 aaPredicted RBP11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms