RNA–Protein interactions for RNA: ENST00000415825.2

TRAPPC13-203, Transcript of trafficking protein particle complex 13, humanhuman

TSL 1 (best)

Gene TRAPPC13, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-203ENST00000415825 IRAK3Q9Y616 596 aa6.08□□□□□ -1.44
TRAPPC13-203ENST00000415825 BMP6P22004 513 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 EGR3Q06889 387 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 DUSP4Q13115 394 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 SLBPQ14493 270 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 SNX17Q15036 470 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 PRAMEF13Q5VWM6 474 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 PPP1R13LQ8WUF5 828 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 INTS4Q96HW7 963 aaKnown RBP6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 GPR160Q9UJ42 338 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 SNCAIPQ9Y6H5 919 aa6.07□□□□□ -1.44
TRAPPC13-203ENST00000415825 CST3P01034 146 aaPredicted RBP6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 ESR1P03372 595 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 ADRB1P08588 477 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 OLFML2BQ68BL8 750 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 PI16Q6UXB8 463 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 CDH24Q86UP0 819 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 PLPPR2Q96GM1 343 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 C19orf44Q9H6X5 657 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 FBRSQ9HAH7 460 aa6.06□□□□□ -1.44
TRAPPC13-203ENST00000415825 ENC1O14682 589 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 PDE4CQ08493 712 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 LRFN4Q6PJG9 635 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 SP8Q8IXZ3 490 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 RBCK1Q9BYM8 510 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 SIRT5Q9NXA8 310 aa6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 YBX2Q9Y2T7 364 aaKnown RBP6.05□□□□□ -1.44
TRAPPC13-203ENST00000415825 PNMA6FA0A0J9YX94 578 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 OR14I1A6ND48 311 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 FBXO24O75426 580 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 INPP5AQ14642 412 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 NKG7Q16617 165 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 WIPI1Q5MNZ9 446 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 PCNX4Q63HM2 1172 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 RIN3Q8TB24 985 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 SIGLEC10Q96LC7 697 aa6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 ZNF552Q9H707 407 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC13-203ENST00000415825 GIPC1O14908 333 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 PAGE1O75459 146 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 GRK4P32298 578 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 AFF3P51826 1226 aaKnown RBP6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 CHMP4BP1P59074 171 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 PLCB3Q01970 1234 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 NR0B2Q15466 257 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 TMPRSS5Q9H3S3 457 aa6.03□□□□□ -1.44
TRAPPC13-203ENST00000415825 MYOCOSA0A1B0GUC4 107 aa6.02□□□□□ -1.45
TRAPPC13-203ENST00000415825 TRIM13O60858 407 aa6.02□□□□□ -1.45
TRAPPC13-203ENST00000415825 ZGLP1P0C6A0 271 aa6.02□□□□□ -1.45
TRAPPC13-203ENST00000415825 PDE4BQ07343 736 aa6.02□□□□□ -1.45
TRAPPC13-203ENST00000415825 ANKS4BQ8N8V4 417 aa6.02□□□□□ -1.45
TRAPPC13-203ENST00000415825 CARNS1A5YM72 827 aa6.01□□□□□ -1.45
TRAPPC13-203ENST00000415825 PI3P19957 117 aa6.01□□□□□ -1.45
TRAPPC13-203ENST00000415825 C3orf58Q8NDZ4 430 aa6.01□□□□□ -1.45
TRAPPC13-203ENST00000415825 FBF1Q8TES7 1133 aa6.01□□□□□ -1.45
TRAPPC13-203ENST00000415825 SGPP1Q9BX95 441 aa6.01□□□□□ -1.45
TRAPPC13-203ENST00000415825 IGHA2P01877 340 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 PGRP06401 933 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 SRSF3P84103 164 aaKnown RBP6□□□□□ -1.45
TRAPPC13-203ENST00000415825 ZXDCQ2QGD7 858 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-203ENST00000415825 SPATS1Q496A3 300 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 ADGRF1Q5T601 910 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 SLC6A19Q695T7 634 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 TSPYL5Q86VY4 417 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-203ENST00000415825 BIN2Q9UBW5 565 aaPredicted RBP6□□□□□ -1.45
TRAPPC13-203ENST00000415825 PALD1Q9ULE6 856 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 SPG7Q9UQ90 795 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 TACC3Q9Y6A5 838 aa6□□□□□ -1.45
TRAPPC13-203ENST00000415825 OTOL1A6NHN0 477 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 ATP2B2Q01814 1243 aa5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 SLC14A2Q15849 920 aa5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 CLEC16AQ2KHT3 1053 aa5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 SKOR2Q2VWA4 1001 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 ZDHHC14Q8IZN3 488 aa5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 GPR62Q9BZJ7 368 aa5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 ASCC2Q9H1I8 757 aaPredicted RBP5.99□□□□□ -1.45
TRAPPC13-203ENST00000415825 PLP2Q04941 152 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 SSPNQ14714 243 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 ENOX2Q16206 610 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 GAB4Q2WGN9 574 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 TMC7Q7Z402 723 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 GGNQ86UU5 652 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 MRPL41Q8IXM3 137 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 TEPSINQ96N21 525 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 DPH2Q9BQC3 489 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 XYLT2Q9H1B5 865 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 DUSP15Q9H1R2 295 aaPredicted RBP5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 DCTN4Q9UJW0 460 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 TTF2Q9UNY4 1162 aaKnown RBP5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 PCDHA11Q9Y5I1 949 aa5.98□□□□□ -1.45
TRAPPC13-203ENST00000415825 ZC3H12DA2A288 527 aaKnown RBP5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 HRKO00198 91 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 ABLIM1O14639 778 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 TNNI2P48788 182 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 ALG1LQ6GMV1 187 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 TTBK2Q6IQ55 1244 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 SV2BQ7L1I2 683 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 ANKRD24Q8TF21 1146 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 TMEM87BQ96K49 555 aa5.97□□□□□ -1.45
TRAPPC13-203ENST00000415825 GPR20Q99678 358 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms