RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ATG3Q9NT62 314 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 KAT6BQ8WYB5 2073 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 GPS2Q13227 327 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 SGMS1Q86VZ5 419 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 TRIM22Q8IYM9 498 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 TRMT112Q9UI30 125 aaKnown RBP16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 V9GY48 417 aaPredicted RBP16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 GLI3P10071 1580 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 PHRF1Q9P1Y6 1649 aaKnown RBP16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 TRIM49BA6NDI0 452 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 N4BP3O15049 544 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 CSF1RP07333 972 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 NT5DC1Q5TFE4 455 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 ZBTB38Q8NAP3 1195 aaPredicted RBP16.55■□□□□ 0.24
SEMA3F-202ENST00000413852 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 CTAGE9A4FU28 777 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 GOLGA6L9A6NEM1 432 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 PATL2C9JE40 543 aaKnown RBP16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 FAM193AP78312 1265 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 KRT31Q15323 416 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 ADGRA1Q86SQ6 560 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 L1RE1Q9UN81 338 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 GDAQ9Y2T3 454 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 ECM29Q5VYK3 1845 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 A0A0G2JS52 829 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 PDE8BO95263 885 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 ARHGAP25P42331 645 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 DHX8Q14562 1220 aaKnown RBP16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 CASP8Q14790 479 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 RRAGBQ5VZM2 374 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 ZNF654Q8IZM8 581 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 VGLL2Q8N8G2 317 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 FANCBQ8NB91 859 aa16.54■□□□□ 0.24
SEMA3F-202ENST00000413852 ANKRD18BA2A2Z9 1011 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 PCCAP05165 728 aaPredicted RBP16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 SPATA5Q8NB90 893 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 AK7Q96M32 723 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 PANX2Q96RD6 677 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 RRP15Q9Y3B9 282 aaKnown RBP16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 PBX1P40424 430 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 UBE3CQ15386 1083 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 RILPL1Q5EBL4 403 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 MTRQ99707 1265 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 ATP8B1O43520 1251 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 NMT2O60551 498 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 TNNT3P45378 269 aaPredicted RBP16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 CTSWP56202 376 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 KIF6Q6ZMV9 814 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 NLRP10Q86W26 655 aa16.53■□□□□ 0.24
SEMA3F-202ENST00000413852 WDR19Q8NEZ3 1342 aa16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 ACTN2P35609 894 aa16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 PPARDQ03181 441 aa16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 KCTD19Q17RG1 926 aaPredicted RBP16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 HDXQ7Z353 690 aa16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 DACH1Q9UI36 760 aa16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 REXO2Q9Y3B8 237 aaKnown RBP16.52■□□□□ 0.24
SEMA3F-202ENST00000413852 TRIM75PA6NK02 468 aa16.52■□□□□ 0.23
SEMA3F-202ENST00000413852 ZNF185O15231 689 aa16.52■□□□□ 0.23
SEMA3F-202ENST00000413852 BRD3Q15059 726 aa16.52■□□□□ 0.23
SEMA3F-202ENST00000413852 RASGRP2Q7LDG7 609 aa16.52■□□□□ 0.23
SEMA3F-202ENST00000413852 XDHP47989 1333 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 KRT9P35527 623 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 LIFRP42702 1097 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 FOXP1Q9H334 677 aaPredicted RBP16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 POLD4Q9HCU8 107 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 ABCF2Q9UG63 623 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 CAMTA1Q9Y6Y1 1673 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 SPATA31A3Q5VYP0 1347 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 AKAP11Q9UKA4 1901 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 KLK7P49862 253 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 PKN1Q16512 942 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 CDKAL1Q5VV42 579 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 SPATA20Q8TB22 786 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 EXOC4Q96A65 974 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 NAPGQ99747 312 aaPredicted RBP16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 ABHD10Q9NUJ1 306 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 MTMR7Q9Y216 660 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 DUSP10Q9Y6W6 482 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 MYH8P13535 1937 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 CTAGE15A4D2H0 777 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 NKRFO15226 690 aaKnown RBP eCLIP16.51■□□□□ 0.231e-5■■■■□ 19.4
SEMA3F-202ENST00000413852 CTAGE8P0CG41 777 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 MCM7P33993 719 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 PTGDRQ13258 359 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 MUM1L1Q5H9M0 696 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 SRLQ86TD4 932 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 CTAGE6Q86UF2 777 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 CTAGE4Q8IX94 777 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 MMS19Q96T76 1030 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 PRDM11Q9NQV5 511 aa16.51■□□□□ 0.23
SEMA3F-202ENST00000413852 TNKSO95271 1327 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 DEXIO95424 95 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 ERCC3P19447 782 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 IL17AQ16552 155 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 GOLGA5Q8TBA6 731 aa16.5■□□□□ 0.23
SEMA3F-202ENST00000413852 EHD4Q9H223 541 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms