RNA–Protein interactions for RNA: ENST00000413433.5

NOD1-203, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-203ENST00000413433 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
NOD1-203ENST00000413433 NME2P22392 152 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 CNGA1P29973 690 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 MASP1P48740 699 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 CLCQ05315 142 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 SSRP1Q08945 709 aaKnown RBP7.61□□□□□ -1.19
NOD1-203ENST00000413433 SPEM2Q0P670 501 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 NEUROD1Q13562 356 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 LAMC2Q13753 1193 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 LLGL2Q6P1M3 1020 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 SYNPOQ8N3V7 929 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 CCDC136Q96JN2 1154 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 RBSNQ9H1K0 784 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 TNKS2Q9H2K2 1166 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 GDF2Q9UK05 429 aaPredicted RBP7.61□□□□□ -1.19
NOD1-203ENST00000413433 PTCH2Q9Y6C5 1203 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 SLIT1O75093 1534 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 UBR1Q8IWV7 1749 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 FGD6Q6ZV73 1430 aa7.61□□□□□ -1.19
NOD1-203ENST00000413433 ASMTLO95671 621 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 GHRHP01286 108 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 PDGFRBP09619 1106 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 NRLP54845 237 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 CASP7P55210 303 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 UBAP2LQ14157 1087 aaKnown RBP7.6□□□□□ -1.19
NOD1-203ENST00000413433 TKFCQ3LXA3 575 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 FERMT3Q86UX7 667 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 RBBP8NLQ8NC74 664 aaPredicted RBP7.6□□□□□ -1.19
NOD1-203ENST00000413433 JDP2Q8WYK2 163 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
NOD1-203ENST00000413433 CLEC4MQ9H2X3 399 aaPredicted RBP7.6□□□□□ -1.19
NOD1-203ENST00000413433 SLC52A1Q9NWF4 448 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 MARK1Q9P0L2 795 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 PLAAQ9Y263 795 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 MAP3K1Q13233 1512 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 FAM135BQ49AJ0 1406 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 PTPN23Q9H3S7 1636 aa7.6□□□□□ -1.19
NOD1-203ENST00000413433 ODR4Q5SWX8 454 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 RAB44Q7Z6P3 723 aaPredicted RBP7.59□□□□□ -1.19
NOD1-203ENST00000413433 SULF2Q8IWU5 870 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 ST13P5Q8NFI4 369 aaPredicted RBP7.59□□□□□ -1.19
NOD1-203ENST00000413433 STAG1Q8WVM7 1258 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 EMILIN2Q9BXX0 1053 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 PBX4Q9BYU1 374 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 MUC3BQ9H195 1237 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 RASSF4Q9H2L5 321 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 PCDHB14Q9Y5E9 798 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 PIK3C2BO00750 1634 aa7.59□□□□□ -1.19
NOD1-203ENST00000413433 EIF2AK4Q9P2K8 1649 aaKnown RBP7.59□□□□□ -1.19
NOD1-203ENST00000413433 ZC3H13Q5T200 1668 aaKnown RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 C1QTNF9BB2RNN3 333 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 NFKBIEO00221 500 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 DIAPH1O60610 1272 aaKnown RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 SMNDC1O75940 238 aaKnown RBP eCLIP7.58□□□□□ -1.2
NOD1-203ENST00000413433 MAPTP10636 758 aaKnown RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 RPL6Q02878 288 aaKnown RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 C6orf15Q6UXA7 325 aaPredicted RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 C19orf47Q8N9M1 422 aaKnown RBP7.58□□□□□ -1.2
NOD1-203ENST00000413433 ZSWIM2Q8NEG5 633 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 EDARADDQ8WWZ3 215 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 HOMER2Q9NSB8 354 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 FAN1Q9Y2M0 1017 aa7.58□□□□□ -1.2
NOD1-203ENST00000413433 PRDM15P57071 1507 aaPredicted RBP7.57□□□□□ -1.2
NOD1-203ENST00000413433 EFCAB6Q5THR3 1501 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 LOC102724428A0A0B4J2F2 783 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 FAM177BA6PVY3 158 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 B2RBV5 119 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 GRIN3BO60391 1043 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 BMP6P22004 513 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 SIK1P57059 783 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 GPLD1P80108 840 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 ATP11AP98196 1134 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 MLLT1Q03111 559 aaPredicted RBP7.57□□□□□ -1.2
NOD1-203ENST00000413433 TNP2Q05952 138 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 PCDH1Q08174 1060 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 SPATC1Q76KD6 591 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 FAM178BQ8IXR5 827 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 DHX37Q8IY37 1157 aaKnown RBP7.57□□□□□ -1.2
NOD1-203ENST00000413433 BSNDQ8WZ55 320 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 ZMYM5Q9UJ78 669 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 PHF24Q9UPV7 400 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 CD2APQ9Y5K6 639 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 NOS1P29475 1434 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 MSH6P52701 1360 aa7.57□□□□□ -1.2
NOD1-203ENST00000413433 SYNMO15061 1565 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 ANKRD50Q9ULJ7 1429 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 RIMS2Q9UQ26 1411 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 LRRFIP1Q32MZ4 808 aaKnown RBP7.56□□□□□ -1.2
NOD1-203ENST00000413433 CT47A1Q5JQC4 288 aaPredicted RBP7.56□□□□□ -1.2
NOD1-203ENST00000413433 ZMYM1Q5SVZ6 1142 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 RASIP1Q5U651 963 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 RUFY4Q6ZNE9 571 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 C1orf229Q6ZS94 237 aaPredicted RBP7.56□□□□□ -1.2
NOD1-203ENST00000413433 HFE2Q6ZVN8 426 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 EEPD1Q7L9B9 569 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 GOLGA6L1Q8N7Z2 621 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 JMYQ8N9B5 988 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 DDX54Q8TDD1 881 aaKnown RBP7.56□□□□□ -1.2
NOD1-203ENST00000413433 GAL3ST3Q96A11 431 aa7.56□□□□□ -1.2
NOD1-203ENST00000413433 ZNF669Q96BR6 464 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms