RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 FTSJ3Q8IY81 847 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 CRACR2BQ8N4Y2 399 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 MYLIPQ8WY64 445 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 NBPF3Q9H094 633 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 CCDC8Q9H0W5 538 aaPredicted RBP11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 C11orf49Q9H6J7 331 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 C1orf115Q9H7X2 142 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 PIH1D3Q9NQM4 214 aaKnown RBP11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 GINM1Q9NU53 330 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 PALD1Q9ULE6 856 aa11.21□□□□□ -0.61
NIF3L1-203ENST00000409129 C19orf81C9J6K1 198 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 HOXA7P31268 230 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 PLA2G5P39877 138 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 DYNLL1P63167 89 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 MTMR2Q13614 643 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 ZNF697Q5TEC3 545 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 FAM109BQ6ICB4 259 aaPredicted RBP11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 ITPRIPQ8IWB1 547 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 P2RX7Q99572 595 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 TRIM34Q9BYJ4 488 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 DNAJC18Q9H819 358 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 TMOD4Q9NZQ9 345 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 MORF4L1Q9UBU8 362 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 DBNLQ9UJU6 430 aaKnown RBP11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 GJD2Q9UKL4 321 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 LOC285556D6RIA3 1793 aa11.2□□□□□ -0.62
NIF3L1-203ENST00000409129 USP17L10C9JJH3 530 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 GDF11O95390 407 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 HLA-DOAP06340 250 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 RLBP1P12271 317 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 CYP7A1P22680 504 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 IRX3P78415 501 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 LRRC26Q2I0M4 334 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 ANKLE1Q8NAG6 615 aa11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 EAF2Q96CJ1 260 aaPredicted RBP11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 TLR7Q9NYK1 1049 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 SAP30BPQ9UHR5 308 aaKnown RBP11.19□□□□□ -0.62
NIF3L1-203ENST00000409129 RLFQ13129 1914 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 TMEM265A0A087WTH1 108 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 IDH1O75874 414 aaKnown RBP11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 HMGCRP04035 888 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 HERVK_113P62684 666 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 HNRNPUQ00839 825 aaKnown RBP eCLIP11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 SHROOM1Q2M3G4 852 aaPredicted RBP11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 CERS3Q8IU89 383 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 USP38Q8NB14 1042 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 GPRC5AQ8NFJ5 357 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 ZBTB21Q9ULJ3 1066 aa11.18□□□□□ -0.62
NIF3L1-203ENST00000409129 SIPA1L1O43166 1804 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 USP5P45974 858 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 CEP85Q6P2H3 762 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 USP17L2Q6R6M4 530 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 MAGEB6Q8N7X4 407 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 MIGA1Q8NAN2 632 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 TTYH1Q9H313 450 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 TXNRD2Q9NNW7 524 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 HMX1Q9NP08 348 aaPredicted RBP11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 EMILIN3Q9NT22 766 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 RBPJLQ9UBG7 517 aa11.17□□□□□ -0.62
NIF3L1-203ENST00000409129 TNFRSF10AO00220 468 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 PEX10O60683 326 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 GH2P01242 217 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 CYP2B6P20813 491 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 MAP3K12Q12852 859 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 Q3C1V9 767 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 TATDN1Q6P1N9 297 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 TMED8Q6PL24 325 aaPredicted RBP11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 ERC1Q8IUD2 1116 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 FAM122AQ96E09 287 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 NUDT12Q9BQG2 462 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 SEMA6BQ9H3T3 888 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 ANTXR1Q9H6X2 564 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 OGDHLQ9ULD0 1010 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 NDUFB9Q9Y6M9 179 aa11.16□□□□□ -0.62
NIF3L1-203ENST00000409129 BDP1A6H8Y1 2624 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 RIOK3O14730 519 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 XRCC5P13010 732 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 FOSL2P15408 326 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 MAPK4P31152 587 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 ERVK-9P63128 1117 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 ERVK-24P63145 666 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 TTC6Q86TZ1 520 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 AACSQ86V21 672 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 CCAR1Q8IX12 1150 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 TRMT44Q8IYL2 757 aaKnown RBP11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 GTF3C2Q8WUA4 911 aaPredicted RBP11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 SOCS4Q8WXH5 440 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 TRIB2Q92519 343 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 EHD4Q9H223 541 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 SERPINB13Q9UIV8 391 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 EXOC6BQ9Y2D4 811 aa11.15□□□□□ -0.62
NIF3L1-203ENST00000409129 REV3LO60673 3130 aa11.15□□□□□ -0.63
NIF3L1-203ENST00000409129 CDK5RAP2Q96SN8 1893 aa11.15□□□□□ -0.63
NIF3L1-203ENST00000409129 MYO5AQ9Y4I1 1855 aaKnown RBP11.15□□□□□ -0.63
NIF3L1-203ENST00000409129 FOCADQ5VW36 1801 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L15C9J2P7 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L13C9JLJ4 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L11C9JVI0 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L18D6R9N7 530 aa11.14□□□□□ -0.63
NIF3L1-203ENST00000409129 USP17L22D6RA61 530 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms