RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 PPP2R5BQ15173 497 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 TTC38Q5R3I4 469 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 TNNI1P19237 187 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 ZYXQ15942 572 aaKnown RBP13.32□□□□□ -0.28
SMCR8-201ENST00000406438 RNF10Q8N5U6 811 aaKnown RBP13.32□□□□□ -0.28
SMCR8-201ENST00000406438 NUP160Q12769 1436 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 PPFIA2O75334 1257 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 P3H4Q92791 437 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 TBC1D7Q9P0N9 293 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 ZNF202O95125 648 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 HERC4Q5GLZ8 1057 aaPredicted RBP13.32□□□□□ -0.28
SMCR8-201ENST00000406438 TRIM31Q9BZY9 425 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 CLGNO14967 610 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 OATP04181 439 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 MAN1A1P33908 653 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 ERO1AQ96HE7 468 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 IWS1Q96ST2 819 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 DIXDC1Q155Q3 683 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 SFMBT2Q5VUG0 894 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 CCDC84Q86UT8 332 aaPredicted RBP13.32□□□□□ -0.28
SMCR8-201ENST00000406438 MLKLQ8NB16 471 aa13.32□□□□□ -0.28
SMCR8-201ENST00000406438 PLEKHM2Q8IWE5 1019 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 PFDN6O15212 129 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 PDE8AO60658 829 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 RASSF4Q9H2L5 321 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 EXOC3O60645 756 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 ARHGAP25P42331 645 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 PAK2Q13177 524 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 TCIRG1Q13488 830 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 MAP3K21Q5TCX8 1036 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 SUPT20HQ8NEM7 779 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 SNX29Q8TEQ0 813 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 SMCR8Q8TEV9 937 aaPredicted RBP13.31□□□□□ -0.28
SMCR8-201ENST00000406438 GPAA1O43292 621 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 DPP8Q6V1X1 898 aaPredicted RBP13.31□□□□□ -0.28
SMCR8-201ENST00000406438 IQCDQ96DY2 449 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 ARMT1Q9H993 441 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 KRT25Q7Z3Z0 450 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 VSIG1Q86XK7 387 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 TMTC1Q8IUR5 882 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 MAST1Q9Y2H9 1570 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 LRRC59Q96AG4 307 aaKnown RBP13.31□□□□□ -0.28
SMCR8-201ENST00000406438 VCX3AQ9NNX9 186 aa13.31□□□□□ -0.28
SMCR8-201ENST00000406438 NELFBQ8WX92 580 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 APPBP2Q92624 585 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 TRPC6Q9Y210 931 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 SLC27A2O14975 620 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 XRCC6P12956 609 aaKnown RBP eCLIP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 INPP5BP32019 993 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 IRX3P78415 501 aaPredicted RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 MGEA5O60502 916 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 RPS6KA1Q15418 735 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 PLBD2Q8NHP8 589 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 CABLES1Q8TDN4 633 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 FAM89AQ96GI7 184 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 HAUS8Q9BT25 410 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 V9GY48 417 aaPredicted RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 TXNDC9O14530 226 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 RNMTO43148 476 aaKnown RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 KRT3P12035 628 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 NLRX1Q86UT6 975 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 SPDYE16A6NNV3 312 aaPredicted RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 SPDYE2Q495Y8 402 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 ARHGEF16Q5VV41 709 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 CPXCR1Q8N123 301 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 REXO1Q8N1G1 1221 aaKnown RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 MYH10P35580 1976 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 MROH5Q6ZUA9 1318 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 PDE6BP35913 854 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 PRR16Q569H4 304 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 ANKRD20A3Q5VUR7 823 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 TRIM50Q86XT4 487 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 SMC5Q8IY18 1101 aa13.3□□□□□ -0.28
SMCR8-201ENST00000406438 CDCA7Q9BWT1 371 aaPredicted RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 IPO11Q9UI26 975 aaKnown RBP13.3□□□□□ -0.28
SMCR8-201ENST00000406438 LMTK3Q96Q04 1460 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 CAPN9O14815 690 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 CD19P15391 556 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 STMN1P16949 149 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 RFC1P35251 1148 aaPredicted RBP13.29□□□□□ -0.28
SMCR8-201ENST00000406438 TCP10Q12799 353 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 PALM2Q8IXS6 379 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
SMCR8-201ENST00000406438 KLHL30Q0D2K2 578 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.29□□□□□ -0.28
SMCR8-201ENST00000406438 ALDH1B1P30837 517 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 METTL22Q9BUU2 404 aaPredicted RBP13.29□□□□□ -0.28
SMCR8-201ENST00000406438 ANO3Q9BYT9 981 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 LARGE2Q8N3Y3 721 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 USP26Q9BXU7 913 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 IFIH1Q9BYX4 1025 aaKnown RBP13.29□□□□□ -0.28
SMCR8-201ENST00000406438 MYO1AQ9UBC5 1043 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 RABGAP1Q9Y3P9 1069 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 GAS7O60861 476 aa13.29□□□□□ -0.28
SMCR8-201ENST00000406438 XRCC5P13010 732 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms