RNA–Protein interactions for RNA: ENST00000404914.7

ATG4B-205, Transcript of autophagy related 4B cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4B, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-205ENST00000404914 RPS6KA5O75582 802 aa17.62■□□□□ 0.41
ATG4B-205ENST00000404914 CTAGE8P0CG41 777 aa17.62■□□□□ 0.41
ATG4B-205ENST00000404914 ADD2P35612 726 aa17.62■□□□□ 0.41
ATG4B-205ENST00000404914 SSRP1Q08945 709 aaKnown RBP17.62■□□□□ 0.41
ATG4B-205ENST00000404914 CPLX2Q6PUV4 134 aaKnown RBP17.62■□□□□ 0.41
ATG4B-205ENST00000404914 CTAGE6Q86UF2 777 aa17.62■□□□□ 0.41
ATG4B-205ENST00000404914 CTAGE4Q8IX94 777 aa17.62■□□□□ 0.41
ATG4B-205ENST00000404914 SYF2O95926 243 aaKnown RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 AMPD2Q01433 879 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 ELOA2Q8IYF1 753 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 NAPGQ99747 312 aaPredicted RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 SLF1Q9BQI6 1058 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 ZSWIM5Q9P217 1185 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 DACH1Q9UI36 760 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 HOOK1Q9UJC3 728 aaKnown RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 ENC1O14682 589 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 EIF3JO75822 258 aaKnown RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 IDH1O75874 414 aaKnown RBP17.61■□□□□ 0.41
ATG4B-205ENST00000404914 SPATA1Q5VX52 437 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 WWC3Q9ULE0 1092 aa17.61■□□□□ 0.41
ATG4B-205ENST00000404914 WDR17Q8IZU2 1322 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 ZMYND10O75800 440 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 FMNL1O95466 1100 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 IVLP07476 585 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 ERCC5P28715 1186 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 CCDC57Q2TAC2 916 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 EARS2Q5JPH6 523 aaKnown RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 RNF40O75150 1001 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 CABP4P57796 275 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 TOM1L2Q6ZVM7 507 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 GSPT2Q8IYD1 628 aaKnown RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 FAM71BQ8TC56 605 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 CHP1Q99653 195 aa17.6■□□□□ 0.41
ATG4B-205ENST00000404914 EPB41L4AQ9HCS5 686 aaPredicted RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 REXO2Q9Y3B8 237 aaKnown RBP17.6■□□□□ 0.41
ATG4B-205ENST00000404914 PPP1R3GB7ZBB8 358 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 POTEB2H3BUK9 544 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 EVA1CP58658 441 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 TRIML1Q8N9V2 468 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 HINFPQ9BQA5 517 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 CABP5Q9NP86 173 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 SRPRBQ9Y5M8 271 aaKnown RBP17.59■□□□□ 0.41
ATG4B-205ENST00000404914 SLC12A7Q9Y666 1083 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 NRAPQ86VF7 1730 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 ZNF532Q9HCE3 1301 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 ZC3H4Q9UPT8 1303 aaKnown RBP17.59■□□□□ 0.41
ATG4B-205ENST00000404914 IFIT3O14879 490 aaKnown RBP17.59■□□□□ 0.41
ATG4B-205ENST00000404914 SRGAP2O75044 1071 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 SGMS1Q86VZ5 419 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 FAM89AQ96GI7 184 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 DCAF5Q96JK2 942 aa17.59■□□□□ 0.41
ATG4B-205ENST00000404914 NAA15Q9BXJ9 866 aaKnown RBP17.59■□□□□ 0.41
ATG4B-205ENST00000404914 MAGEA9P43362 315 aa17.58■□□□□ 0.41
ATG4B-205ENST00000404914 NOM1Q5C9Z4 860 aaKnown RBP17.58■□□□□ 0.41
ATG4B-205ENST00000404914 VPS16Q9H269 839 aa17.58■□□□□ 0.41
ATG4B-205ENST00000404914 MYO6Q9UM54 1294 aa17.58■□□□□ 0.41
ATG4B-205ENST00000404914 MAP3K15Q6ZN16 1313 aa17.58■□□□□ 0.41
ATG4B-205ENST00000404914 PRPF6O94906 941 aaKnown RBP17.58■□□□□ 0.4
ATG4B-205ENST00000404914 AKAP17AQ02040 695 aaKnown RBP17.58■□□□□ 0.4
ATG4B-205ENST00000404914 MSL3Q8N5Y2 521 aaKnown RBP17.58■□□□□ 0.4
ATG4B-205ENST00000404914 PAGE5Q96GU1 130 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 CTNND2Q9UQB3 1225 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 RIC1Q4ADV7 1423 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 hCG_1642624A0A1W2PR95 340 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 HSP90B2PQ58FF3 399 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 TMEM87BQ96K49 555 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 ABHD10Q9NUJ1 306 aa17.58■□□□□ 0.4
ATG4B-205ENST00000404914 SLIT2O94813 1529 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 MYBL2P10244 700 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 IFNAR1P17181 557 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 FECHP22830 423 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 KRT31Q15323 416 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 WHAMMP3Q1A5X7 153 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 TTC31Q49AM3 519 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-205ENST00000404914 ICE2Q659A1 982 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 MMS19Q96T76 1030 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 ZNF330Q9Y3S2 320 aaPredicted RBP17.57■□□□□ 0.4
ATG4B-205ENST00000404914 CORO7P57737 925 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 RRP12Q5JTH9 1297 aaKnown RBP17.57■□□□□ 0.4
ATG4B-205ENST00000404914 BLZF1Q9H2G9 400 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 TAB2Q9NYJ8 693 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 GUCA1BQ9UMX6 200 aa17.57■□□□□ 0.4
ATG4B-205ENST00000404914 TTF2Q9UNY4 1162 aaKnown RBP17.57■□□□□ 0.4
ATG4B-205ENST00000404914 STK36Q9NRP7 1315 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 RILPL1Q5EBL4 403 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 FBXO41Q8TF61 875 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 EHD4Q9H223 541 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 PDE6AP16499 860 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 RABEP2Q9H5N1 569 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 TOMM22Q9NS69 142 aa17.56■□□□□ 0.4
ATG4B-205ENST00000404914 BCL9LQ86UU0 1499 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 SMIM22K7EJ46 135 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 ATP1A1P05023 1023 aaKnown RBP17.55■□□□□ 0.4
ATG4B-205ENST00000404914 SAFBQ15424 915 aaKnown RBP eCLIP17.55■□□□□ 0.4
ATG4B-205ENST00000404914 SH3RF1Q7Z6J0 888 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 CNGA4Q8IV77 575 aa17.55■□□□□ 0.4
ATG4B-205ENST00000404914 ZNF579Q8NAF0 562 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms