RNA–Protein interactions for RNA: ENST00000399409.7

RABGGTA-202, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RABGGTA, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-202ENST00000399409 HIBADHP31937 336 aaKnown RBP26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 MECOMQ03112 1051 aa26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 BICDL1Q6ZP65 573 aa26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 FCHSD1Q86WN1 690 aa26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 NARFQ9UHQ1 456 aa26.39■■□□□ 1.81
RABGGTA-202ENST00000399409 NUTM2BA6NNL0 878 aaPredicted RBP26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 NUTM2EB1AL46 878 aaPredicted RBP26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 SMIM22K7EJ46 135 aa26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 PLEKHA8P1O95397 391 aa26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 NUTM2AQ8IVF1 878 aaPredicted RBP26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 TAF1P21675 1872 aa26.38■■□□□ 1.81
RABGGTA-202ENST00000399409 ERCC5P28715 1186 aaPredicted RBP26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 NT5C2P49902 561 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 SBK1Q52WX2 424 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 ERO1AQ96HE7 468 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 IGSF3O75054 1194 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 ZNF18P17022 549 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 CTCFLQ8NI51 663 aaPredicted RBP26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 ARID3AQ99856 593 aa26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 ARPP21Q9UBL0 812 aaPredicted RBP26.37■■□□□ 1.81
RABGGTA-202ENST00000399409 PRDM1O75626 825 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 SETDB2Q96T68 719 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 DCP1AQ9NPI6 582 aaPredicted RBP26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 MAST2Q6P0Q8 1798 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 PLCD1P51178 756 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 TNFRSF25Q93038 417 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 NFE2L3Q9Y4A8 694 aa26.36■■□□□ 1.81
RABGGTA-202ENST00000399409 LAMB1P07942 1786 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 RPS6KA4O75676 772 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 SLFN14P0C7P3 912 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 PDILTQ8N807 584 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 MYH13Q9UKX3 1938 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 CNTNAP5Q8WYK1 1306 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 SLU7O95391 586 aaKnown RBP26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 NBPF5PQ86XG9 351 aaPredicted RBP26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 FEZ1Q99689 392 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 COL24A1Q17RW2 1714 aa26.35■■□□□ 1.81
RABGGTA-202ENST00000399409 CDK11BP21127 795 aaKnown RBP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 TBX2Q13207 712 aaPredicted RBP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 SPTY2D1Q68D10 685 aaPredicted RBP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 USP49Q70CQ1 688 aa26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 SMAP1Q8IYB5 467 aaPredicted RBP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 L2HGDHQ9H9P8 463 aa26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 FAM205CA6NFA0 338 aa26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 FMR1Q06787 632 aaKnown RBP eCLIP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 SH3RF1Q7Z6J0 888 aa26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 INTS13Q9NVM9 706 aa26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 ZNF215Q9UL58 517 aaPredicted RBP26.34■■□□□ 1.81
RABGGTA-202ENST00000399409 TMEM232C9JQI7 657 aa26.33■■□□□ 1.81
RABGGTA-202ENST00000399409 KLRK1P26718 216 aa26.33■■□□□ 1.81
RABGGTA-202ENST00000399409 TRAPPC10P48553 1259 aa26.33■■□□□ 1.81
RABGGTA-202ENST00000399409 TTC38Q5R3I4 469 aa26.33■■□□□ 1.81
RABGGTA-202ENST00000399409 GRAMD1CQ8IYS0 662 aa26.33■■□□□ 1.81
RABGGTA-202ENST00000399409 EARS2Q5JPH6 523 aaKnown RBP26.32■■□□□ 1.8
RABGGTA-202ENST00000399409 TPTE2Q6XPS3 522 aa26.32■■□□□ 1.8
RABGGTA-202ENST00000399409 DHX58Q96C10 678 aa26.32■■□□□ 1.8
RABGGTA-202ENST00000399409 SRBD1Q8N5C6 995 aaKnown RBP26.32■■□□□ 1.8
RABGGTA-202ENST00000399409 hCG_1642624A0A1W2PR95 340 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 ARHGAP6O43182 974 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 ZSCAN12O43309 604 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 ZPR1O75312 459 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 NPY5RQ15761 445 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 PYM1Q9BRP8 204 aaKnown RBP26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 TFCP2L1Q9NZI6 479 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 SCG2P13521 617 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 ATP2C1P98194 919 aaPredicted RBP26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 SPECC1LQ69YQ0 1117 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 SYT10Q6XYQ8 523 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 SYMPKQ92797 1274 aaKnown RBP26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 PAGE5Q96GU1 130 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 PHLPP2Q6ZVD8 1323 aa26.31■■□□□ 1.8
RABGGTA-202ENST00000399409 KIF5BP33176 963 aa26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 ETF1P62495 437 aaKnown RBP26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 FAM98CQ17RN3 349 aaKnown RBP26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 EPSTI1Q96J88 318 aa26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 GSDMAQ96QA5 445 aa26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 ZNF827Q17R98 1081 aa26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 HOMER1Q86YM7 354 aa26.3■■□□□ 1.8
RABGGTA-202ENST00000399409 CCDC88AQ3V6T2 1871 aa26.29■■□□□ 1.8
RABGGTA-202ENST00000399409 KIAA1551Q9HCM1 1747 aa26.29■■□□□ 1.8
RABGGTA-202ENST00000399409 LTBP4Q8N2S1 1624 aa26.29■■□□□ 1.8
RABGGTA-202ENST00000399409 ZNF174Q15697 407 aa26.29■■□□□ 1.8
RABGGTA-202ENST00000399409 PFKFB3Q16875 520 aaPredicted RBP26.29■■□□□ 1.8
RABGGTA-202ENST00000399409 A0A087X0B3 334 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 PRDX5P30044 214 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 NAA30Q147X3 362 aaPredicted RBP26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 TSPY2A6NKD2 308 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 NLRP5P59047 1200 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 FAM47AQ5JRC9 791 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 SPATA1Q5VX52 437 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 TMEM139Q8IV31 216 aa26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 ZNF397Q8NF99 534 aaPredicted RBP26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 SRP68Q9UHB9 627 aaKnown RBP26.28■■□□□ 1.8
RABGGTA-202ENST00000399409 GOLGA6L9A6NEM1 432 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 STX10O60499 249 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 CALML3P27482 149 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 KCNQ4P56696 695 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 DPYDQ12882 1025 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 CCDC93Q567U6 631 aa26.27■■□□□ 1.8
RABGGTA-202ENST00000399409 CCDC178Q5BJE1 867 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms